Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_P03
         (898 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   1.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   4.3  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = +2

Query: 434 DYIFMYMKP*LMFCYFLFIFILY 502
           DY+ + ++   +FCYF+++F +Y
Sbjct: 136 DYVSL-LQLVFVFCYFIYLFTVY 157



 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -1

Query: 649 FKYLFTVYY 623
           F YLFTVYY
Sbjct: 150 FIYLFTVYY 158


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +1

Query: 430 NRLHIYVYETITNVLLLFIYFYIICWNSYKFY 525
           +R+H++V        LLF YF +     YK+Y
Sbjct: 132 SRIHLFVRYVFVTSYLLFDYF-VQRNQEYKYY 162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,192
Number of Sequences: 336
Number of extensions: 3118
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24927353
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)