Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_P02
         (907 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY307930-1|AAQ73824.1|  340|Homo sapiens intestinal mucin MUC3A ...    33   1.9  
AL590551-1|CAH71650.1|  600|Homo sapiens fibronectin type III do...    32   2.5  
U70323-1|AAB19200.1| 1312|Homo sapiens ataxin-2 protein.               31   4.3  
AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellu...    31   4.3  
U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein.                   31   7.6  

>AY307930-1|AAQ73824.1|  340|Homo sapiens intestinal mucin MUC3A
           precursor protein.
          Length = 340

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 21/69 (30%), Positives = 34/69 (49%)
 Frame = +1

Query: 142 TLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 321
           T +TPL      T  + T + TT +T++    + T   T+TN  T++  T + P A  T 
Sbjct: 226 TERTPLPTGSIHTTTSPTPVFTTLKTAVTSTSSITSSITSTNTVTSMTTTASQPTATNTL 285

Query: 322 SLPLSLVLA 348
           S P   +L+
Sbjct: 286 SSPTRTILS 294


>AL590551-1|CAH71650.1|  600|Homo sapiens fibronectin type III
           domain containing 1 protein.
          Length = 600

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 20/54 (37%), Positives = 23/54 (42%)
 Frame = +1

Query: 142 TLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 303
           T  TPL    TP   TAT   TT        + TT + T T  +TT   T T P
Sbjct: 161 TTTTPLPTTTTPRPTTATTRRTTTTRRTTTRRPTTTVRTTTRTTTTTTPTPTTP 214


>U70323-1|AAB19200.1| 1312|Homo sapiens ataxin-2 protein.
          Length = 1312

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = -2

Query: 876 PXWXGXRXPXRRPGQ-XXGAGXGRXPNXXPPXPG 778
           P W   + P RR G+   GA  G  P+  PP PG
Sbjct: 26  PGWRSLQRPARRSGRGGGGAAPGPYPSAAPPPPG 59


>AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellular
           receptor 1 protein.
          Length = 359

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +1

Query: 187 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP---KADLTSSLP 330
           T    +TT RTS  +P TTT+  T    + ++  T TVP       T+S+P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVPTTMTVSTTTSVP 186



 Score = 30.7 bits (66), Expect = 7.6
 Identities = 23/70 (32%), Positives = 36/70 (51%)
 Frame = +1

Query: 139 PTLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLT 318
           PT+ T       PT  T T   TT  T++ +P TTT+  T T +STT  +  T      T
Sbjct: 139 PTVTTVRTSTTVPT--TTTVPTTTVPTTMSIPTTTTVPTTMT-VSTTTSVP-TTTSIPTT 194

Query: 319 SSLPLSLVLA 348
           +S+P++  ++
Sbjct: 195 TSVPVTTTVS 204


>U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein.
          Length = 4861

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +1

Query: 175  PTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLV 342
            P Q+  T + T+   S      ++ +E  T  +T V  T TVP ++    +PLSL+
Sbjct: 2626 PAQQAQTPVTTSPSASSTTSFMSSSLEDTTTATTPVTDTETVPASESPGVMPLSLL 2681


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,212,639
Number of Sequences: 237096
Number of extensions: 2007970
Number of successful extensions: 11071
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11062
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)