Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_P01
         (897 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g62000.1 68416.m06963 O-methyltransferase family 3 protein se...    30   1.8  
At1g77240.1 68414.m08996 AMP-binding protein, putative strong si...    29   4.2  
At4g13290.1 68417.m02078 cytochrome P450 71A19, putative (CYP71A...    29   5.5  
At1g47310.1 68414.m05238 expressed protein                             29   5.5  

>At3g62000.1 68416.m06963 O-methyltransferase family 3 protein
           several O-methyltransferases - different species;
           contains Pfam 01596 O-methyltransferase domain
          Length = 278

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
 Frame = +1

Query: 232 IAKCSEXLKXKQGXVIKEAVKRLIENGKXNTMDFAYQLWTKDGKEIVKSYFPIQFRVIFT 411
           +A  S  +  KQG +  E++K +I+NG+  + DFA+       K + + YF +  +++  
Sbjct: 165 LAGVSHKVNVKQG-LAAESLKSMIQNGEGASYDFAF---VDADKRMYQDYFELLLQLVRV 220

Query: 412 EQTVKLINKRDHHALK--LIDQQNHNKIAFGDSKDKTSKKVSWKFTPV 549
              + + N   H  +   +++      I   + K    K+VS    P+
Sbjct: 221 GGVIVMDNVLWHGRVSDPMVNDAKTISIRNFNKKLMDDKRVSISMVPI 268


>At1g77240.1 68414.m08996 AMP-binding protein, putative strong
           similarity to AMP-binding protein GI:1903034 from
           [Brassica napus]; contains Pfam AMP-binding domain
           PF00501
          Length = 545

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +1

Query: 370 VKSYFPIQFRVIFTEQTVKLINKR-DHHALKLIDQQNHNKIAFGDSKDKTSKKVSWKFTP 546
           V S + +QF V  +   +  IN R D HAL ++ + + +K+ F D    +    +  F P
Sbjct: 76  VPSVYELQFAVPMSGAVLNNINPRLDAHALSVLLRHSESKLVFVDHHSSSLVLEAVSFLP 135

Query: 547 VLENNRV 567
             E  R+
Sbjct: 136 KDERPRL 142


>At4g13290.1 68417.m02078 cytochrome P450 71A19, putative (CYP71A19)
           Identical to Cytochrome P450 (SP:Q9T0K0) [Arabidopsis
           thaliana]; similar to cytochrome P450LXXIA1, Persea
           americana, M32885
          Length = 490

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -1

Query: 453 GVMVPFVYELDSLLGEDHSKLDGEVRFDDFL 361
           G  +P +  +D + G+DH   + + RFD+FL
Sbjct: 221 GEYIPSLSWIDKIRGQDHKMEEVDKRFDEFL 251


>At1g47310.1 68414.m05238 expressed protein
          Length = 395

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 19/67 (28%), Positives = 35/67 (52%)
 Frame = +1

Query: 409 TEQTVKLINKRDHHALKLIDQQNHNKIAFGDSKDKTSKKVSWKFTPVLENNRVYFKIMST 588
           T QTV  +  +   A  ++  Q   + + G ++   SKKV+W+  P +E  RV+F++ + 
Sbjct: 286 TRQTVSSVTAK-LKASGMVRFQLEIERSIGKNESVISKKVAWRTKPKIE--RVWFEVTAK 342

Query: 589 EDXQYLK 609
            +   LK
Sbjct: 343 IEGDKLK 349


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,647,092
Number of Sequences: 28952
Number of extensions: 250098
Number of successful extensions: 775
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2110422216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)