Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_O20
(962 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 40 5e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.034
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.079
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.079
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.18
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.24
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 29 0.74
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 28 2.3
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 5.2
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 6.9
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 9.1
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 39.9 bits (89), Expect = 5e-04
Identities = 35/130 (26%), Positives = 37/130 (28%), Gaps = 8/130 (6%)
Frame = -1
Query: 935 PPXXKXXXKXPP---PPXXXPHXXPPPGXXPXXXPPFS--PXXXPXGXPPPPXXGXXXGE 771
PP K PP P P P G P P + P P G PP P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Query: 770 XPXGGXAXXXXXXXXXXXXXXXXXXXXPGAXK--XXFXPXPPPX*KTPPPPXP-XXXPXX 600
P A P K P PPP + PP P P P
Sbjct: 1152 VPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPS-EAPPVPKPSVGVPPV 1210
Query: 599 PPPXPXPXXP 570
PPP P P
Sbjct: 1211 PPPSTAPPVP 1220
Score = 33.5 bits (73), Expect = 0.045
Identities = 28/127 (22%), Positives = 29/127 (22%), Gaps = 2/127 (1%)
Frame = -1
Query: 941 PXPPXXKXXXKXPPPPXXXPHXXPPPGXXPXXXPPFS--PXXXPXGXPPPPXXGXXXGEX 768
P P P P P P G P P + P P G PP P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171
Query: 767 PXGGXAXXXXXXXXXXXXXXXXXXXXPGAXKXXFXPXPPPX*KTPPPPXPXXXPXXPPPX 588
P P K P P T PP P P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPV 1231
Query: 587 PXPXXPP 567
P PP
Sbjct: 1232 PTAKAPP 1238
Score = 33.1 bits (72), Expect = 0.060
Identities = 32/130 (24%), Positives = 32/130 (24%), Gaps = 7/130 (5%)
Frame = -1
Query: 935 PPXXKXXXKXPP-------PPXXXPHXXPPPGXXPXXXPPFSPXXXPXGXPPPPXXGXXX 777
PP K PP PP P PP P PP P P P G
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV-PKPSVAAPPVPAPSGAPP 1160
Query: 776 GEXPXGGXAXXXXXXXXXXXXXXXXXXXXPGAXKXXFXPXPPPX*KTPPPPXPXXXPXXP 597
P P P P P PP P P P P
Sbjct: 1161 VPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP--P 1218
Query: 596 PPXPXPXXPP 567
P P PP
Sbjct: 1219 VPTPSAGLPP 1228
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -1
Query: 662 PXPPPX*KTPPPPXPXXXPXXPPPXPXPXXP 570
P P P PP P P P P P P P
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTSTPPVP 1053
Score = 27.1 bits (57), Expect = 3.9
Identities = 25/112 (22%), Positives = 26/112 (23%), Gaps = 4/112 (3%)
Frame = -1
Query: 941 PXPPXXKXXXKXPPPPXXXPHXXPPPGXXPXXXPPFSPXXXPX---GXPPPPXXGXXXGE 771
P P P P P P G P P + P G PP P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 770 XPXGGXAXXXXXXXXXXXXXXXXXXXXP-GAXKXXFXPXPPPX*KTPPPPXP 618
P A P P P P K PP P P
Sbjct: 1191 VPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 25.8 bits (54), Expect = 9.1
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = -1
Query: 662 PXPPPX*KTPPPPXPXXXPXXPPPXPXP 579
P P P P P P PPP P P
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.9 bits (74), Expect = 0.034
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 656 PPPX*KTPPPPXPXXXPXXPPPXPXPXXP 570
PPP PPPP P PP P P P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 29.5 bits (63), Expect = 0.74
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Frame = -1
Query: 653 PPX*KTP-PPPXPXXXPXXPPPXPXPXXPP 567
PP P PPP P P P P P PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Frame = -1
Query: 902 PPPXXXPHXXPPPGXXPXXXPPFSPXXX--PXGXPPPPXXGXXXGEXPXGG 756
PP P PPP P PP +P P PPPP P G
Sbjct: 1699 PPQMSAPTPPPPPMSVPP--PPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 26.2 bits (55), Expect = 6.9
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -1
Query: 941 PXPPXXKXXXKXPPPPXXXPHXXPPPGXXPXXXPPFSPXXXP 816
P PP PPPP P PP P P S P
Sbjct: 1705 PTPPPPPM--SVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.7 bits (71), Expect = 0.079
Identities = 32/128 (25%), Positives = 33/128 (25%), Gaps = 3/128 (2%)
Frame = -1
Query: 941 PXPPXXKXXXKXPPPPXXXPHXXPPPGXXPXXXPPFSPXXXPXGX--PPPPXXGXXXGEX 768
P PP + K P PPP P S P G PPPP
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPR----SA 369
Query: 767 PXGGXAXXXXXXXXXXXXXXXXXXXXPGAXKXXFXPXP-PPX*KTPPPPXPXXXPXXPPP 591
P G PG P TPP P P P PP
Sbjct: 370 PSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP 429
Query: 590 XPXPXXPP 567
P PP
Sbjct: 430 SLPPSAPP 437
Score = 29.1 bits (62), Expect = 0.98
Identities = 34/133 (25%), Positives = 36/133 (27%), Gaps = 8/133 (6%)
Frame = -1
Query: 941 PXPPXXKXXXKXPPPPXXXPHXX--PPP--GXXPXXXPPFSPXXXPXGXPP--PPXXGXX 780
P PP + PPPP P PPP PP P P P PP
Sbjct: 352 PLPPQGRSAPP-PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNAS 410
Query: 779 XGEXPXGGXAXXXXXXXXXXXXXXXXXXXXPGAXKXXFXPXPPPX*KTPP--PPXPXXXP 606
P GA P PP + P PP P P
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGA------PAAPPLPPSAPIAPPLPAGMP 464
Query: 605 XXPPPXPXPXXPP 567
PP P PP
Sbjct: 465 AAPPLPPAAPAPP 477
Score = 28.3 bits (60), Expect = 1.7
Identities = 28/119 (23%), Positives = 29/119 (24%), Gaps = 6/119 (5%)
Frame = -1
Query: 905 PPPPXXXPHXX---PPPGXXPXXXPPFSPXXXPXGXPPPPXXGXXXGEXPXGGXAXXXXX 735
PPPP PP G PP PPP P A
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRS 399
Query: 734 XXXXXXXXXXXXXXXPGAXKXXFXPX--PPPX*KTPPPPXPXXXPXXPP-PXPXPXXPP 567
P P PP + PP P P PP P P PP
Sbjct: 400 APALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 26.6 bits (56), Expect = 5.2
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -1
Query: 911 KXPPPPXXXPHXXPPPGXXPXXXPPFSPXXXPXGXPPPP 795
K PPPP PPP PP PPPP
Sbjct: 309 KRPPPP-------PPPSRRNRGKPPIGNGSSNSSLPPPP 340
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.7 bits (71), Expect = 0.079
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = -1
Query: 923 KXXXKXPPPPXXXPHXXPPPGXXPXXXPPFSPXXXPXGXPPPPXXGXXXGEXP 765
K K PPPP P P P PP +P PPPP G P
Sbjct: 726 KLLLKSPPPPPPAV-IVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 32.3 bits (70), Expect = 0.10
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 641 KTPPPPXPXXXPXXPPPXPXPXXPP 567
K+PPPP P P P P P PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPP 754
Score = 30.3 bits (65), Expect = 0.42
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 662 PXPPPX*KTPPPPXPXXXPXXPPPXPXPXXPP 567
P P P PPPP P P P P PP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.9 bits (64), Expect = 0.56
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = -1
Query: 950 KXXPXPPXXKXXXKXPPPPXXXPHXXPPPGXXPXXXPPFSPXXXPXGXPPPPXXGXXXG 774
K P PP P P P P G P PP PPPP G
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 29.9 bits (64), Expect = 0.56
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 662 PXPPPX*KTPPPPXPXXXPXXPPPXPXPXXPP 567
P PPP P P P P PPP P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIP-VPPPAPIMGGPP 762
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Frame = -3
Query: 900 PXXXXPPXXXPPXXXSXGGPPXFXXXP--PXXGPPPP 796
P P PP GGPP P GPPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 26.2 bits (55), Expect = 6.9
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = -1
Query: 662 PXPPPX*KTPPP-PXPXXXPXXPPPXPXPXXPPFXXXXXGA 543
P PPP P P P P P P P PP GA
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGA 773
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.5 bits (68), Expect = 0.18
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 653 PPX*KTPPPPXPXXXPXXPPPXPXP 579
PP PPPP P P PP P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 899 PPXXXPHXXPPPGXXPXXXPPFSP 828
PP P PPPG P PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = -1
Query: 869 PPGXXPXXXPP--FSPXXXPXGXPPPPXXG 786
PPG P PP F P P PPPP G
Sbjct: 5 PPGNPPPPPPPPGFEPPSQP---PPPPPPG 31
Score = 26.2 bits (55), Expect = 6.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 635 PPPPXPXXXPXXPPPXPXPXXPP 567
PPPP P PP P P PP
Sbjct: 9 PPPPPPPPG-FEPPSQPPPPPPP 30
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.1 bits (67), Expect = 0.24
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +1
Query: 568 GGXXGXGXGGGXXGXXXGXGGGGVFXXGGGXG 663
GG G G G G G G GGG GGG G
Sbjct: 235 GGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPG 266
Score = 30.7 bits (66), Expect = 0.32
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +2
Query: 749 GXPPPGGXPXXXXLXMGGGGPXXGGXXXKXGGPPXEXXXGGXXXGGXXXXGG 904
G PPPG GG G GG GGP G GG GG
Sbjct: 198 GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGG 249
Score = 29.1 bits (62), Expect = 0.98
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +1
Query: 568 GGXXGXGXGGGXXGXXXGXGGGGVFXXGGGXG 663
GG G G G G G GGG+ GGG G
Sbjct: 228 GGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPG 259
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 568 GGXXGXGXGGGXXGXXXGXGGGGVFXXGGGXG 663
GG G G G G G GGG GGG G
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLG 252
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 29.5 bits (63), Expect = 0.74
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -1
Query: 662 PXPPPX*KTPPPPXPXXXPXXPPPXPXPXXPP 567
P PPP + P P P PP P PP
Sbjct: 49 PLPPPTRRLPRKPLPFRSTSLQPPSSQPPAPP 80
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -1
Query: 872 PPPGXXPXXXPPFSPXXXPXGXPPPP 795
P PG PF P P PPPP
Sbjct: 149 PRPGTVKSSASPFVPNQNPSAPPPPP 174
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 5.2
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = +1
Query: 568 GGXXGXGXG-GGXXGXXXGXGGGGVFXXGGGXG 663
GG G G GG G G GGG GGG G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRG 41
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.2 bits (55), Expect = 6.9
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = -1
Query: 905 PPPPXXXPHXXPPPGXXPXXXPPFSP 828
PPPP P PP PP P
Sbjct: 1884 PPPPMALPKAGPPSAAPTSALPPAGP 1909
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 9.1
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Frame = -1
Query: 662 PXPPPX*KTPPPPXPXXXPXXP---PPXPXPXXPP 567
P P + PPP P P P PP P PP
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.156 0.544
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,641,174
Number of Sequences: 5004
Number of extensions: 26238
Number of successful extensions: 321
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 493304942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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