Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_O16
(901 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 148 5e-36
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 113 2e-25
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 79 5e-15
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 9e-12
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-09
SB_56184| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_54491| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_12094| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.00041) 31 1.3
SB_26483| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_47813| Best HMM Match : HEAT (HMM E-Value=5.9e-06) 30 2.9
SB_55724| Best HMM Match : SURF6 (HMM E-Value=0.62) 29 3.9
SB_41386| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 28 8.9
SB_55326| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_13990| Best HMM Match : Ribosomal_L19 (HMM E-Value=4.1e-15) 28 8.9
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 148 bits (359), Expect = 5e-36
Identities = 66/132 (50%), Positives = 88/132 (66%)
Frame = +1
Query: 388 CRXPWXNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEG 567
C +L + YLDLYLIHWP ++++ FP D+ G + ++ D DTWKAME LV EG
Sbjct: 91 CVDSLKDLGLDYLDLYLIHWPLSFRDGDEFFPKDEQGNVLYAYHDPCDTWKAMEKLVDEG 150
Query: 568 LVKSIGVSNFNSKQLERLLQHATVKPVVNQVECHPYLNQKRLKEFCEARGVKITXYSPLG 747
LVK+IG+SNFNSKQ++ + A +KPV NQVECHP LNQ +L + + ++ YSPLG
Sbjct: 151 LVKAIGLSNFNSKQVDDICAIARIKPVANQVECHPLLNQAKLIDHHKKHNIQTIAYSPLG 210
Query: 748 SPDRPWGQARRP 783
S DRPW + P
Sbjct: 211 SLDRPWAKPDDP 222
Score = 89.8 bits (213), Expect = 3e-18
Identities = 47/86 (54%), Positives = 50/86 (58%)
Frame = +3
Query: 123 VXFXXGASXPVFGXGXWXSKPGXVXXAVKXAIDIGXRHIDCAYVYGNXXXVGXAITSKIK 302
V G PV G G W SKPG V AVK AI G RHIDCAY Y N VG A+ ++
Sbjct: 4 VKLNNGLEMPVLGLGTWKSKPGQVENAVKFAIKEGYRHIDCAYAYRNEKEVGDAL-RELL 62
Query: 303 EGVVTRXXLFITSKLWNTFHRPDLVR 380
VV R LFITSKLWNT H P VR
Sbjct: 63 GSVVERKDLFITSKLWNTKHNPKDVR 88
Score = 56.4 bits (130), Expect = 3e-08
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = +2
Query: 761 PGAKPDDPQXMEDPKLKXIADRLGKTVAQVLIRYQIDXGXIVXPE 895
P AKPDDP M DP + +ADR +TVAQ+ IR+QI G +V P+
Sbjct: 215 PWAKPDDPHVMRDPTMVAMADRYSRTVAQICIRFQIQRGVLVIPK 259
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 113 bits (272), Expect = 2e-25
Identities = 54/110 (49%), Positives = 76/110 (69%)
Frame = +1
Query: 388 CRXPWXNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEG 567
C+ NL + YLDLYLIH P A+K+ L + G I ++ +TW+AME LV +G
Sbjct: 132 CQATLKNLQLDYLDLYLIHIPVAFKKGVRLPHSIAEGIIGYTPEGVQNTWQAMEGLVAKG 191
Query: 568 LVKSIGVSNFNSKQLERLLQHATVKPVVNQVECHPYLNQKRLKEFCEARG 717
L K+IGVSNF+ K+L +LL+ A++ P NQVE HPYL Q++LKEFC+++G
Sbjct: 192 LCKAIGVSNFSVKRLNKLLETASIVPACNQVELHPYLPQEKLKEFCDSKG 241
Score = 77.8 bits (183), Expect = 1e-14
Identities = 37/77 (48%), Positives = 46/77 (59%)
Frame = +3
Query: 171 WXSKPGXVXXAVKXAIDIGXRHIDCAYVYGNXXXVGXAITSKIKEGVVTRXXLFITSKLW 350
W S V AV+ AI++G RHIDCA +YGN +G A++ + EG V R LF+TSKLW
Sbjct: 60 WQSSKEEVGNAVRLAIELGYRHIDCAEIYGNEGEIGEALSEVLTEGKVKREELFVTSKLW 119
Query: 351 NTFHRPDLVRGALQEXL 401
H PD V A Q L
Sbjct: 120 CDSHHPDDVLPACQATL 136
Score = 39.1 bits (87), Expect = 0.005
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +3
Query: 171 WXSKPGXVXXAVKXAIDIGXRHIDCAYVYGNXXXVGXAITSKIKEGVVTR 320
W S G V AV+ A ++G R IDCA ++GN G A++ + +G V R
Sbjct: 7 WHSYKGKVGNAVRLAAELGYRLIDCAEIHGNE---GEALSGVLTKGKVKR 53
Score = 36.7 bits (81), Expect = 0.026
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +1
Query: 688 RLKEFCEARGVKITXYSPLGSPDR 759
+ K+FC+++G+ +T YSPLG+P R
Sbjct: 280 KCKDFCDSKGILLTAYSPLGNPGR 303
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 79.0 bits (186), Expect = 5e-15
Identities = 46/112 (41%), Positives = 61/112 (54%)
Frame = +1
Query: 409 LNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGV 588
L + Y+DLYLIH+P SG V +W+AM L GL++SIGV
Sbjct: 156 LGLGYVDLYLIHFPV------------PSG--------VVGSWQAMIDLRSRGLIRSIGV 195
Query: 589 SNFNSKQLERLLQHATVKPVVNQVECHPYLNQKRLKEFCEARGVKITXYSPL 744
SNFN + LE L Q V P VNQ+E HP+L K L ++C+ + I +SPL
Sbjct: 196 SNFNIQHLEALRQQTGVVPAVNQIEVHPFLQMKELTQYCKRHNITIQAFSPL 247
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 797 DPKLKXIADRLGKTVAQVLIRYQIDXGXIVXPE 895
DP L +A + KT AQ+L+R+ + G P+
Sbjct: 255 DPILSYVAKKYNKTTAQILVRWSLQKGYACIPK 287
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 68.1 bits (159), Expect = 9e-12
Identities = 38/114 (33%), Positives = 62/114 (54%)
Frame = +1
Query: 409 LNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGV 588
L+ Y+DL+LIH K T G+ + + + ++WKAME L ++G ++S+GV
Sbjct: 420 LSTDYIDLFLIH----SKTCDDFLLTCAEGEPRGT---WKESWKAMEELHRQGKIRSLGV 472
Query: 589 SNFNSKQLERLLQHATVKPVVNQVECHPYLNQKRLKEFCEARGVKITXYSPLGS 750
SNFN +L+ L+ ATV Q P+ ++ + FC G++ YS LG+
Sbjct: 473 SNFNVDELQELVNFATVPVSAVQNWFDPFHQDRKARRFCNKHGIRYIGYSTLGT 526
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 60.9 bits (141), Expect = 1e-09
Identities = 34/112 (30%), Positives = 59/112 (52%)
Frame = +1
Query: 409 LNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGV 588
L++ Y+DL+LIH P + G I + + A+ L +EGL++S+GV
Sbjct: 114 LDIGYVDLFLIHTP-------------RPGNI-------IAAYDALLTLKEEGLIRSVGV 153
Query: 589 SNFNSKQLERLLQHATVKPVVNQVECHPYLNQKRLKEFCEARGVKITXYSPL 744
SNF LE L + P +NQ+E +P+ Q+ + ++C G+ + Y+P+
Sbjct: 154 SNFGVHHLEELRKAGCRTPAINQIEINPFWRQEEIIKYCNKHGITVEGYAPV 205
>SB_56184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 38.3 bits (85), Expect = 0.008
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +1
Query: 508 FSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLLQHATVKPVVNQVE---CHPYL 678
+SD Y+D + L EG ++ I ++NF++ +++ + H +K NQ++
Sbjct: 32 YSDKRYLDALLHLSELQSEGKIQEISLTNFDTNRMQEITDHG-IKISSNQIQFSLIDRRA 90
Query: 679 NQKRLKEFCEARGVKITXYSPL 744
N+K +K FC G+ + Y +
Sbjct: 91 NEKMVK-FCLDHGISLLAYGTI 111
>SB_54491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 33.5 bits (73), Expect = 0.24
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +1
Query: 445 WPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLL 624
W + E SLFP + Y TW++++P + + K I + SK ER+
Sbjct: 69 WSFDWDEGASLFPDFFPRSTTAKTLSYEVTWRSLDPAKEYSMAKDIFRDSILSKDTERIE 128
Query: 625 QHATVKPVV 651
+ K ++
Sbjct: 129 PDSEAKQII 137
>SB_12094| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.00041)
Length = 754
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +2
Query: 443 TGPRPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSWR 616
T PR R+T LS R + S+ S T + +++RV E+PTS+ +SW+
Sbjct: 208 TSPRQKRETLLSRRRSTGESSTQEDS---TGDDTSTSATERVRRAVLEAPTSSENSWK 262
>SB_26483| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1702
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 545 WSRSSKRVWSRASESPTSTRSSWRGCCSTRLSSRSS 652
W +W R+ + T RS W G C T L ++ S
Sbjct: 1014 WDAIHSELWLRSQGTQTKRRSPWTGICRTFLQAKFS 1049
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 30.3 bits (65), Expect = 2.2
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = +2
Query: 452 RPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSWRGCCST 631
R +T+LSSR ++ + SR G+ SRS +S S S + +R RG +
Sbjct: 637 RSRSRTSLSSRSRSRDRGGSRR------GKRRSRSRSSSYSSRSRSRSRSRDRGRGRKRS 690
Query: 632 RLSSRSSIRWNVILTSTRN 688
R SRSS + L+ +R+
Sbjct: 691 RRRSRSSSHSSSSLSRSRS 709
>SB_47813| Best HMM Match : HEAT (HMM E-Value=5.9e-06)
Length = 623
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +1
Query: 406 NLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIG 585
NL + +L LI + KE + +G++ D WKAMEP V+ + + I
Sbjct: 376 NLPLDHLQQKLIQETEKLKEIAPHLTQEAAGQVPVVAGRPKDVWKAMEPEVRATVQEHIA 435
Query: 586 VSNFNSKQLE 615
S LE
Sbjct: 436 RDEGESPSLE 445
>SB_55724| Best HMM Match : SURF6 (HMM E-Value=0.62)
Length = 1105
Score = 29.5 bits (63), Expect = 3.9
Identities = 23/78 (29%), Positives = 35/78 (44%)
Frame = +2
Query: 452 RPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSWRGCCST 631
+PTR + + + N + +R S T GR + + R+ S +E S T
Sbjct: 620 KPTRLSNTTEKGRNVILKPTRLSNTTEKGRNYRANPTRL-SNTTEKGRKVISK-----PT 673
Query: 632 RLSSRSSIRWNVILTSTR 685
RLS+ WN+ L STR
Sbjct: 674 RLSNTKEQGWNIRLKSTR 691
>SB_41386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 443 TGPRPTRKTALSSRPTNQVKSSSR--TSITWTPGRLWSRSSKRVWSRASESPTSTR 604
T +++++ + RPT++ + SR T WTPGR + +R + +PT R
Sbjct: 127 TAEDTSKESSKAKRPTSRPRPPSRLLTKRAWTPGRRTPFACRRAPTPGRRTPTPGR 182
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 28.3 bits (60), Expect = 8.9
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 440 YTGPRPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSW 613
Y + +R+ SSR T++ +S R+ P R WSRS S +S S + T W
Sbjct: 323 YRALQRSRQHKPSSRNTSRSRSPVRSRSPIHP-RSWSRSVSHSLSHSSASRSPTPEDW 379
>SB_55326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1289
Score = 28.3 bits (60), Expect = 8.9
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +1
Query: 454 AYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLLQHA 633
AY + G F Q K + SD+ V T ++P+ E L ++GVS KQ HA
Sbjct: 1146 AYSKHG--FTRSQLPKARESDIPLVVTLTVVQPVDTEALGMTLGVS---LKQKLSATDHA 1200
Query: 634 TVKPVVNQVECHPY-LNQKRLKEFC 705
+ V N E Y N R + C
Sbjct: 1201 LLFRVSNHAEYVVYRQNVVRSRVLC 1225
>SB_13990| Best HMM Match : Ribosomal_L19 (HMM E-Value=4.1e-15)
Length = 267
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 637 VKPVVNQVECHPYLNQKRLKEFCEARGVKIT 729
+K + Q +CH L Q ++ EFC V +T
Sbjct: 115 IKTFLEQRDCHDRLQQLKVPEFCVGSTVAVT 145
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,078,052
Number of Sequences: 59808
Number of extensions: 463576
Number of successful extensions: 1800
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1795
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2586032617
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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