Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_O15
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0946 - 29075600-29076229                                         74   1e-13
07_01_0908 + 7653813-7653849,7655220-7655350,7655946-7656020,765...    29   6.5  

>03_05_0946 - 29075600-29076229
          Length = 209

 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 32/58 (55%), Positives = 40/58 (68%)
 Frame = +2

Query: 563 AHRNLPGDDYTDCSFIFLYILCTMSXXXNIXKLLGFAPSRAASKXGGALFAAPXTHSN 736
           +HR +PG+D TDCS +FLY LC++S   N+ KLLGFAP RAA+  GG LF  P    N
Sbjct: 152 SHRGVPGNDPTDCSMVFLYFLCSISIRTNLQKLLGFAPPRAAAAAGGGLFPMPDPKVN 209



 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 46/143 (32%), Positives = 65/143 (45%), Gaps = 18/143 (12%)
 Frame = +1

Query: 190 WSDSLLIVFISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKE--------- 342
           + DSL +V IS  TA L E ++W+L+YRT  Y  L+  +ER S+KL+  K          
Sbjct: 10  YGDSLSVVAISGATAVLCEAISWLLIYRTATYNSLRATIERHSRKLDAMKAGASNSSSSS 69

Query: 343 -----AHGDSLDXXXXXXXXXXXXXXXXXXXD----LSLVKMKSMFAIGFAFTALLSMFN 495
                A G S                     D    LSL K+KS   +      +  + N
Sbjct: 70  SAGAGASGSSQPAGSSSSRAKKMDRVETSLKDAARELSLSKLKSGAVVAAVLFVVFGLLN 129

Query: 496 SIFDGRVVAXLPFYPISWIQGLS 564
           S+F+GR VA LPF P+  +Q +S
Sbjct: 130 SLFEGRAVAKLPFAPVPLVQRMS 152


>07_01_0908 +
           7653813-7653849,7655220-7655350,7655946-7656020,
           7657007-7657111,7657648-7657911,7658474-7658614
          Length = 250

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +1

Query: 286 QKLKVEVERQSKKLEKRKEAHGDSLD 363
           Q++ +E ERQ++++E   E  GD++D
Sbjct: 148 QRIMMEFERQNERMEMTSEVMGDAID 173


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,929,706
Number of Sequences: 37544
Number of extensions: 241914
Number of successful extensions: 493
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)