Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_O15
         (875 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50044-9|CAA90361.1|  186|Caenorhabditis elegans Hypothetical pr...   140   1e-33
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr...    28   7.6  
U40028-8|AAA81119.1|  242|Caenorhabditis elegans Hypothetical pr...    28   7.6  
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro...    28   7.6  
AL110485-7|CAB60355.1|  237|Caenorhabditis elegans Hypothetical ...    28   7.6  

>Z50044-9|CAA90361.1|  186|Caenorhabditis elegans Hypothetical
           protein F22B5.10 protein.
          Length = 186

 Score =  140 bits (339), Expect = 1e-33
 Identities = 68/126 (53%), Positives = 89/126 (70%)
 Frame = +1

Query: 187 MWSDSLLIVFISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDX 366
           M  D LLI+ I+  TA  GEG+TW+LVYR++ Y++LK ++++++KKLEK+K+  GD+ D 
Sbjct: 1   MLGDCLLIIAIAFGTALAGEGITWLLVYRSDHYKRLKADMDKKTKKLEKKKQEVGDTNDK 60

Query: 367 XXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAXLPFYPIS 546
                             D+S+ KMKSMFAIG AFTALLS FNSIF+GRVVA LPFYPI 
Sbjct: 61  NIKRKLEREEERLKATNRDMSMFKMKSMFAIGLAFTALLSTFNSIFEGRVVAKLPFYPIG 120

Query: 547 WIQGLS 564
           +IQGLS
Sbjct: 121 FIQGLS 126



 Score = 75.4 bits (177), Expect = 5e-14
 Identities = 33/58 (56%), Positives = 43/58 (74%)
 Frame = +2

Query: 563 AHRNLPGDDYTDCSFIFLYILCTMSXXXNIXKLLGFAPSRAASKXGGALFAAPXTHSN 736
           +HRNL G+D TDCSFIFLYILCTM+   N+ K+LGFAPSRA ++   + +A P +  N
Sbjct: 126 SHRNLIGEDMTDCSFIFLYILCTMTVRQNLQKILGFAPSRAMARQQSSPWAPPNSQMN 183


>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical
           protein C25D7.3 protein.
          Length = 2150

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +1

Query: 265 VYRTEKYQKLKVEVERQSKKLEKR-KEAH 348
           +YRTE ++K+K   ER  +  EKR KE H
Sbjct: 850 IYRTELWEKMKPVYERLKRDKEKREKEWH 878


>U40028-8|AAA81119.1|  242|Caenorhabditis elegans Hypothetical
           protein T05A7.1 protein.
          Length = 242

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -1

Query: 134 IISNVLRINLHNVDTVDKYSRDFLLDEVQNLK 39
           I S+  R  +HNV TVD Y  + L  E++N++
Sbjct: 44  INSSKCRDGVHNVITVDSYGNETLPVEIRNIR 75


>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger
           protein protein.
          Length = 2150

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +1

Query: 265 VYRTEKYQKLKVEVERQSKKLEKR-KEAH 348
           +YRTE ++K+K   ER  +  EKR KE H
Sbjct: 850 IYRTELWEKMKPVYERLKRDKEKREKEWH 878


>AL110485-7|CAB60355.1|  237|Caenorhabditis elegans Hypothetical
           protein Y46G5A.12 protein.
          Length = 237

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/26 (38%), Positives = 20/26 (76%)
 Frame = +1

Query: 286 QKLKVEVERQSKKLEKRKEAHGDSLD 363
           QK+ +E E+QS+ ++ ++E  GD++D
Sbjct: 123 QKIMMEFEKQSEIMDMKEEVMGDAID 148


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,304,888
Number of Sequences: 27780
Number of extensions: 233382
Number of successful extensions: 668
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)