Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_O14
         (906 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_52189| Best HMM Match : DUF454 (HMM E-Value=5.7)                    40   0.004
SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.)                40   0.004
SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.2  
SB_29737| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.2  
SB_21722| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.2  
SB_48113| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.2  
SB_17601| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.2  
SB_8730| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   5.2  
SB_466| Best HMM Match : No HMM Matches (HMM E-Value=.)                29   5.2  
SB_1158| Best HMM Match : Toxin_24 (HMM E-Value=0.57)                  29   6.8  
SB_56405| Best HMM Match : Fels1 (HMM E-Value=6.5)                     29   6.8  

>SB_52189| Best HMM Match : DUF454 (HMM E-Value=5.7)
          Length = 203

 Score = 39.5 bits (88), Expect = 0.004
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = +1

Query: 676 RGXAVCVLGXLPXPRSXTRCA 738
           RG AVCVLG LP PRS TRCA
Sbjct: 108 RGEAVCVLGALPLPRSLTRCA 128


>SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1081

 Score = 39.5 bits (88), Expect = 0.004
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = +1

Query: 676 RGXAVCVLGXLPXPRSXTRCA 738
           RG AVCVLG LP PRS TRCA
Sbjct: 472 RGEAVCVLGALPLPRSLTRCA 492


>SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 901

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -2

Query: 905 GGAXGKTPXXRXXYGXXXLXGXWVTRFXXGYP 810
           GGA GKTP  R  YG     G  +T     YP
Sbjct: 760 GGAYGKTPATRPFYGSWPFAGLLLTCSFLRYP 791


>SB_29737| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 128

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -2

Query: 905 GGAXGKTPXXRXXYGXXXLXGXWVTRFXXGYP 810
           GGA GKTP  R  YG     G  +T     YP
Sbjct: 2   GGAYGKTPATRPFYGSWPFAGLLLTCSFLRYP 33


>SB_21722| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 284

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -2

Query: 905 GGAXGKTPXXRXXYGXXXLXGXWVTRFXXGYP 810
           GGA GKTP  R  YG     G  +T     YP
Sbjct: 25  GGAYGKTPATRPFYGSWPFAGLLLTCSFLRYP 56


>SB_48113| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 466

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -2

Query: 905 GGAXGKTPXXRXXYGXXXLXGXWVTRFXXGYP 810
           GGA GKTP  R  YG     G  +T     YP
Sbjct: 407 GGAYGKTPATRPFYGSWPFAGLLLTCSFLRYP 438


>SB_17601| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 649

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -2

Query: 905 GGAXGKTPXXRXXYGXXXLXGXWVTRFXXGYP 810
           GGA GKTP  R  YG     G  +T     YP
Sbjct: 556 GGAYGKTPATRPFYGSWPFAGLLLTCSFLRYP 587


>SB_8730| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 83

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -2

Query: 905 GGAXGKTPXXRXXYGXXXLXGXWVTRFXXGYP 810
           GGA GKTP  R  YG     G  +T     YP
Sbjct: 24  GGAYGKTPATRPFYGSWPFAGLLLTCSFLRYP 55


>SB_466| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 139

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -2

Query: 905 GGAXGKTPXXRXXYGXXXLXGXWVTRFXXGYP 810
           GGA GKTP  R  YG     G  +T     YP
Sbjct: 2   GGAYGKTPATRPFYGSWPFAGLLLTCSFLRYP 33


>SB_1158| Best HMM Match : Toxin_24 (HMM E-Value=0.57)
          Length = 497

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 17/61 (27%), Positives = 31/61 (50%)
 Frame = -2

Query: 239 QGSDSYNCTHYSKRYYAIDSVLACLTFFFHRIYSFSKGQSEHFCD*LIC*KQLFFKFYLY 60
           Q   SY  T Y   ++ +D ++  L FFF+ +  F KG  + + + LI   ++   F ++
Sbjct: 213 QFGPSYKATEYRALFHVLDEIVP-LVFFFYPVV-FRKGNIKEYEEALI---RISIMFIMH 267

Query: 59  C 57
           C
Sbjct: 268 C 268


>SB_56405| Best HMM Match : Fels1 (HMM E-Value=6.5)
          Length = 119

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 12/16 (75%), Positives = 12/16 (75%)
 Frame = +2

Query: 659 NESAPPGXXRFAYWAL 706
           NESA  G  RFAYWAL
Sbjct: 25  NESATRGERRFAYWAL 40


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,442,918
Number of Sequences: 59808
Number of extensions: 272018
Number of successful extensions: 1094
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2609867019
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)