Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_O14
         (906 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    23   2.9  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   5.1  

>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 263 LKTTMFQYQGSDSYNCTHYSKRYYAI 186
           LKT M  + G   Y+C+H  +++  +
Sbjct: 25  LKTHMRLHTGEKPYHCSHCDRQFVQV 50


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 82  YFSNFIYIALENQKS*EFPIVSRN 11
           YFS F Y+    ++  E+P  SR+
Sbjct: 528 YFSEFAYLGKPTKEDSEWPSYSRD 551


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,793
Number of Sequences: 438
Number of extensions: 2426
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)