Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_O11
(894 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14; Eukaryota|... 65 2e-09
UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33; Eukary... 60 6e-08
UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24; Eukary... 58 4e-07
UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core eu... 54 4e-06
UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep: LO... 50 8e-05
UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S riboso... 44 0.005
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 44 0.005
UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep: Pr... 42 0.028
UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9; T... 41 0.049
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 39 0.20
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 38 0.46
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 38 0.46
UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1; ... 35 3.2
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 33 9.8
>UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14;
Eukaryota|Rep: Ribosomal protein L38 - Spodoptera
frugiperda (Fall armyworm)
Length = 70
Score = 65.3 bits (152), Expect = 2e-09
Identities = 36/69 (52%), Positives = 38/69 (55%)
Frame = +2
Query: 95 MPRXIXXXXXFLIKAXXXXAXSVXXXXXPEXVXFXVRCSXFLYTLVXXDXXXAEXLKXXL 274
MPR I FL+KA A SV + V F VRCS FLYTLV D AE LK L
Sbjct: 1 MPREIKDIKDFLLKARRKDAKSVKIKKNQQNVKFKVRCSRFLYTLVITDKEKAEKLKQSL 60
Query: 275 PPGLXVKXV 301
PPGL VK V
Sbjct: 61 PPGLQVKEV 69
>UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33;
Eukaryota|Rep: 60S ribosomal protein L38 - Homo sapiens
(Human)
Length = 70
Score = 60.5 bits (140), Expect = 6e-08
Identities = 33/67 (49%), Positives = 36/67 (53%)
Frame = +2
Query: 95 MPRXIXXXXXFLIKAXXXXAXSVXXXXXPEXVXFXVRCSXFLYTLVXXDXXXAEXLKXXL 274
MPR I FL+ A A SV + V F VRCS +LYTLV D AE LK L
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSL 60
Query: 275 PPGLXVK 295
PPGL VK
Sbjct: 61 PPGLAVK 67
>UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24;
Eukaryota|Rep: 60S ribosomal protein L38 -
Caenorhabditis elegans
Length = 70
Score = 57.6 bits (133), Expect = 4e-07
Identities = 30/67 (44%), Positives = 35/67 (52%)
Frame = +2
Query: 95 MPRXIXXXXXFLIKAXXXXAXSVXXXXXPEXVXFXVRCSXFLYTLVXXDXXXAEXLKXXL 274
MP+ I FL+KA A SV F VRC+ +LYTLV D AE LK L
Sbjct: 1 MPKEIKEIKDFLVKARRKDAKSVKIKKNSNNTKFKVRCASYLYTLVVADKDKAEKLKQSL 60
Query: 275 PPGLXVK 295
PPG+ VK
Sbjct: 61 PPGIQVK 67
>UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core
eudicotyledons|Rep: 60S ribosomal protein L38 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 69
Score = 54.4 bits (125), Expect = 4e-06
Identities = 29/67 (43%), Positives = 35/67 (52%)
Frame = +2
Query: 95 MPRXIXXXXXFLIKAXXXXAXSVXXXXXPEXVXFXVRCSXFLYTLVXXDXXXAEXLKXXL 274
MP+ I FL+ A A SV + V F VRCS +LYTL D A+ LK L
Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSL 60
Query: 275 PPGLXVK 295
PPGL V+
Sbjct: 61 PPGLSVQ 67
>UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep:
LOC548667 protein - Xenopus tropicalis (Western clawed
frog) (Silurana tropicalis)
Length = 419
Score = 50.0 bits (114), Expect = 8e-05
Identities = 26/48 (54%), Positives = 28/48 (58%)
Frame = +2
Query: 152 AXSVXXXXXPEXVXFXVRCSXFLYTLVXXDXXXAEXLKXXLPPGLXVK 295
A SV + V F VRCS +LYTLV D AE LK LPPGL VK
Sbjct: 369 AKSVKIKKNKDNVKFKVRCSKYLYTLVITDKEKAEKLKQSLPPGLSVK 416
>UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S ribosomal
protein L38; n=1; Danio rerio|Rep: PREDICTED: similar to
60S ribosomal protein L38 - Danio rerio
Length = 154
Score = 44.0 bits (99), Expect = 0.005
Identities = 25/57 (43%), Positives = 28/57 (49%)
Frame = +2
Query: 95 MPRXIXXXXXFLIKAXXXXAXSVXXXXXPEXVXFXVRCSXFLYTLVXXDXXXAEXLK 265
+PR I FL+ A A SV + V F VRCS LYTLV D AE LK
Sbjct: 17 LPREIEEIKDFLLTAKRKDAKSVKIKKNKDNVKFKVRCSRHLYTLVITDKEKAEKLK 73
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 44.0 bits (99), Expect = 0.005
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +2
Query: 626 RGEAVCVLGXLPXPXSLTRXARSFGCGXRYXL 721
R +C G +P P SLTR ARSFGCG RY L
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRL 57
>UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep:
Predicted protein - Ajellomyces capsulatus NAm1
Length = 79
Score = 41.5 bits (93), Expect = 0.028
Identities = 19/38 (50%), Positives = 22/38 (57%)
Frame = +2
Query: 188 VXFXVRCSXFLYTLVXXDXXXAEXLKXXLPPGLXVKXV 301
+ F VRC FLYTLV D A+ LK LPP L + V
Sbjct: 34 IKFKVRCQRFLYTLVLKDSDKADKLKQSLPPSLKIADV 71
>UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9;
Trypanosomatidae|Rep: Ribosomal protein L38, putative -
Leishmania major
Length = 83
Score = 40.7 bits (91), Expect = 0.049
Identities = 22/64 (34%), Positives = 28/64 (43%)
Frame = +2
Query: 95 MPRXIXXXXXFLIKAXXXXAXSVXXXXXPEXVXFXVRCSXFLYTLVXXDXXXAEXLKXXL 274
MPR I FL A V P F VRCS +LYTLV D A+ ++ +
Sbjct: 1 MPREIKTLKEFLAICSRKDARCVKVKHNPSATKFKVRCSRYLYTLVVNDKKKADKIERSI 60
Query: 275 PPGL 286
P +
Sbjct: 61 HPSV 64
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 38.7 bits (86), Expect = 0.20
Identities = 24/47 (51%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 623 ARGEAVCVLGXLPXPXSLTRXARSFGCGXRYXL-XPRRXXGYPQXQG 760
AR EAV VL LP S TR RS GCG P R G PQ QG
Sbjct: 273 ARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 37.5 bits (83), Expect = 0.46
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = +1
Query: 670 LXDSXXSVVRLRXAVSPXSKAVXXLSTXSG 759
L DS SVVRLR AVS SKAV LST SG
Sbjct: 23 LTDSLRSVVRLRRAVSAHSKAVIRLSTESG 52
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 37.5 bits (83), Expect = 0.46
Identities = 17/29 (58%), Positives = 17/29 (58%)
Frame = -3
Query: 760 PLXLWITXXPPWXEXIPXXAAERPSXXSQ 674
PL LWIT PP E P A ERPS SQ
Sbjct: 33 PLILWITVLPPLSELTPLAAVERPSVASQ 61
>UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L38 - Entamoeba histolytica HM-1:IMSS
Length = 77
Score = 34.7 bits (76), Expect = 3.2
Identities = 19/66 (28%), Positives = 27/66 (40%)
Frame = +2
Query: 95 MPRXIXXXXXFLIKAXXXXAXSVXXXXXPEXVXFXVRCSXFLYTLVXXDXXXAEXLKXXL 274
MP+ + L +V E F VRC+ +LYT + D AE LK +
Sbjct: 1 MPKQVQEFKQILKLLKSGSIRAVRVKTNGENTKFKVRCAKYLYTYICADKAKAEELKKAI 60
Query: 275 PPGLXV 292
P + V
Sbjct: 61 PKDIHV 66
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 33.1 bits (72), Expect = 9.8
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 627 GXRRFAYWALFRFL 668
G RRFAYWALFRFL
Sbjct: 34 GERRFAYWALFRFL 47
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 367,251,822
Number of Sequences: 1657284
Number of extensions: 2959507
Number of successful extensions: 2301
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2301
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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