Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_O10
         (1306 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1174 - 26696869-26698191                                         29   6.1  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   8.1  

>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 21/70 (30%), Positives = 23/70 (32%)
 Frame = +2

Query: 812  PPLVLPXXXPPPXXGAXXTPPXNXTXPXPTRXPXAXXXXXXXXXXXXLXXIXXFPPPTLX 991
            PP+V P   PPP       PP     P PTR P                     PPP+  
Sbjct: 172  PPVVQPKPQPPPSLQPPSPPP-----PPPTRPPSVKPPVVQPKPQPP----PTLPPPSPP 222

Query: 992  XXPXARPPXT 1021
              P   PP T
Sbjct: 223  PPPPTVPPRT 232


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 23/85 (27%), Positives = 30/85 (35%), Gaps = 2/85 (2%)
 Frame = +3

Query: 639 RVXRPPHASXVTGX*XSXPPGXPPX--SXXXATXXSXXXRXPPXYPPXALPAXAXTXSXX 812
           R+  PP A  +     + PP  PP   S    T  +   + PP  PP  LP    T    
Sbjct: 648 RLVPPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPG 707

Query: 813 PXSSXXXSXHXRPXAPXPXHRXTRP 887
             S+        P  P P +R   P
Sbjct: 708 VPSAPPP-----PPPPPPANRSNGP 727


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,334,092
Number of Sequences: 37544
Number of extensions: 221637
Number of successful extensions: 627
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4073878200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)