Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_O10
         (1306 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   2.0  
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   8.2  

>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 290

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 24/95 (25%), Positives = 25/95 (26%), Gaps = 1/95 (1%)
 Frame = +2

Query: 812  PPLVLPXXXP-PPXXGAXXTPPXNXTXPXPTRXPXAXXXXXXXXXXXXLXXIXXFPPPTL 988
            PP   P   P PP   A   PP N   P P   P                    +PPP  
Sbjct: 106  PPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPN----PPYPPPLY 161

Query: 989  XXXPXARPPXTGXXPQXLXXXCVTXXXSPPGPCLP 1093
               P   PP     P             PP P  P
Sbjct: 162  PPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYP 196


>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2870

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 22/95 (23%), Positives = 25/95 (26%)
 Frame = +2

Query: 812  PPLVLPXXXPPPXXGAXXTPPXNXTXPXPTRXPXAXXXXXXXXXXXXLXXIXXFPPPTLX 991
            PP  LP    PP       PP   T P     P                 +    PP + 
Sbjct: 908  PPPPLPLAPEPPPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSAL----PPPIP 963

Query: 992  XXPXARPPXTGXXPQXLXXXCVTXXXSPPGPCLPT 1096
                  PP     P        T    PP  C+PT
Sbjct: 964  ATQVPPPPLPPLPPPPPPVQTTTAPTLPPASCMPT 998


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,885,762
Number of Sequences: 59808
Number of extensions: 159633
Number of successful extensions: 348
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 293
length of database: 16,821,457
effective HSP length: 84
effective length of database: 11,797,585
effective search space used: 4129154750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)