Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_O10
(1306 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U89278-1|AAC51170.1| 433|Homo sapiens polyhomeotic 2 homolog pr... 33 2.3
L21990-1|AAA60301.1| 464|Homo sapiens spiceosomal protein protein. 32 5.3
BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein. 32 5.3
BC009903-1|AAH09903.1| 464|Homo sapiens splicing factor 3a, sub... 32 5.3
BC004434-1|AAH04434.1| 464|Homo sapiens splicing factor 3a, sub... 32 5.3
AK025837-1|BAB15254.1| 616|Homo sapiens protein ( Homo sapiens ... 32 5.3
AC005263-1|AAC25613.1| 464|Homo sapiens SP62_HUMAN protein. 32 5.3
>U89278-1|AAC51170.1| 433|Homo sapiens polyhomeotic 2 homolog
protein.
Length = 433
Score = 33.1 bits (72), Expect = 2.3
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +3
Query: 1011 PPXPGTAPNXXRPXALPXRXRXPVPAS 1091
P P AP P ALP R R PVPAS
Sbjct: 9 PRAPAAAPQPRPPPALPPRPRAPVPAS 35
>L21990-1|AAA60301.1| 464|Homo sapiens spiceosomal protein protein.
Length = 464
Score = 31.9 bits (69), Expect = 5.3
Identities = 24/92 (26%), Positives = 27/92 (29%), Gaps = 1/92 (1%)
Frame = +2
Query: 812 PPLVLPXXXPPPXXGAXXTPPXNXTXPXPTRXPXAXXXXXXXXXXXXLXXIXXFPPPTL- 988
PPL P PPP G PP T P P+ P + P +
Sbjct: 245 PPL--PESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVH 302
Query: 989 XXXPXARPPXTGXXPQXLXXXCVTXXXSPPGP 1084
P PP G P T PP P
Sbjct: 303 PPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAP 334
>BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein.
Length = 481
Score = 31.9 bits (69), Expect = 5.3
Identities = 24/92 (26%), Positives = 27/92 (29%), Gaps = 1/92 (1%)
Frame = +2
Query: 812 PPLVLPXXXPPPXXGAXXTPPXNXTXPXPTRXPXAXXXXXXXXXXXXLXXIXXFPPPTL- 988
PPL P PPP G PP T P P+ P + P +
Sbjct: 245 PPL--PESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVH 302
Query: 989 XXXPXARPPXTGXXPQXLXXXCVTXXXSPPGP 1084
P PP G P T PP P
Sbjct: 303 PPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAP 334
>BC009903-1|AAH09903.1| 464|Homo sapiens splicing factor 3a, subunit
2, 66kDa protein.
Length = 464
Score = 31.9 bits (69), Expect = 5.3
Identities = 24/92 (26%), Positives = 27/92 (29%), Gaps = 1/92 (1%)
Frame = +2
Query: 812 PPLVLPXXXPPPXXGAXXTPPXNXTXPXPTRXPXAXXXXXXXXXXXXLXXIXXFPPPTL- 988
PPL P PPP G PP T P P+ P + P +
Sbjct: 245 PPL--PESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVH 302
Query: 989 XXXPXARPPXTGXXPQXLXXXCVTXXXSPPGP 1084
P PP G P T PP P
Sbjct: 303 PPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAP 334
>BC004434-1|AAH04434.1| 464|Homo sapiens splicing factor 3a, subunit
2, 66kDa protein.
Length = 464
Score = 31.9 bits (69), Expect = 5.3
Identities = 24/92 (26%), Positives = 27/92 (29%), Gaps = 1/92 (1%)
Frame = +2
Query: 812 PPLVLPXXXPPPXXGAXXTPPXNXTXPXPTRXPXAXXXXXXXXXXXXLXXIXXFPPPTL- 988
PPL P PPP G PP T P P+ P + P +
Sbjct: 245 PPL--PESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVH 302
Query: 989 XXXPXARPPXTGXXPQXLXXXCVTXXXSPPGP 1084
P PP G P T PP P
Sbjct: 303 PPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAP 334
>AK025837-1|BAB15254.1| 616|Homo sapiens protein ( Homo sapiens cDNA:
FLJ22184 fis, clone HRC00983. ).
Length = 616
Score = 31.9 bits (69), Expect = 5.3
Identities = 28/100 (28%), Positives = 30/100 (30%), Gaps = 3/100 (3%)
Frame = +2
Query: 803 LSXPPLV-LPXXXPPPXX--GAXXTPPXNXTXPXPTRXPXAXXXXXXXXXXXXLXXIXXF 973
L+ PPL LP PPP A T P T P P P
Sbjct: 22 LTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIAT 81
Query: 974 PPPTLXXXPXARPPXTGXXPQXLXXXCVTXXXSPPGPCLP 1093
PPP A PP G L +PP LP
Sbjct: 82 PPPQAPPA-LASPPLQGLPSPPLSPLATPPPQAPPALALP 120
>AC005263-1|AAC25613.1| 464|Homo sapiens SP62_HUMAN protein.
Length = 464
Score = 31.9 bits (69), Expect = 5.3
Identities = 24/92 (26%), Positives = 27/92 (29%), Gaps = 1/92 (1%)
Frame = +2
Query: 812 PPLVLPXXXPPPXXGAXXTPPXNXTXPXPTRXPXAXXXXXXXXXXXXLXXIXXFPPPTL- 988
PPL P PPP G PP T P P+ P + P +
Sbjct: 245 PPL--PESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVH 302
Query: 989 XXXPXARPPXTGXXPQXLXXXCVTXXXSPPGP 1084
P PP G P T PP P
Sbjct: 303 PPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAP 334
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,737,201
Number of Sequences: 237096
Number of extensions: 1154990
Number of successful extensions: 2575
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2502
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18825810660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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