Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_O10
         (1306 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    29   7.2  
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    29   7.2  

>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = +3

Query: 693 PPGXPPXSXXXATXXSXXXRXPPXYPPXALPA 788
           PP  PP S   A   S     PP  PP  LPA
Sbjct: 612 PPPPPPQSFGMAPISSAAPPPPPPPPPMGLPA 643


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = +3

Query: 693 PPGXPPXSXXXATXXSXXXRXPPXYPPXALPA 788
           PP  PP S   A   S     PP  PP  LPA
Sbjct: 438 PPPPPPQSFGMAPISSAAPPPPPPPPPMGLPA 469


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,031,239
Number of Sequences: 27780
Number of extensions: 137315
Number of successful extensions: 366
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 328
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3642337300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)