Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_O09
         (884 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   3.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   4.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   5.6  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   9.7  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   9.7  

>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +1

Query: 595 FICNHYXLX*XSXPXXLPPFHVP 663
           F+CN+Y       P  LPP   P
Sbjct: 169 FLCNNYLPLPQVPPLPLPPIFAP 191


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +3

Query: 93  FYLYLLFCC 119
           +Y++LLFCC
Sbjct: 262 YYMHLLFCC 270


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = +3

Query: 66  VKENVSNEKFYLYLLFCCGSCRL 134
           +KEN+   ++++Y+      C L
Sbjct: 287 IKENLEQSRYFIYMFVSVWKCLL 309


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = +3

Query: 66  VKENVSNEKFYLYLLFCCGSCRL 134
           +KEN+   ++++Y+      C L
Sbjct: 287 IKENLEQSRYFIYMFVSVWKCLL 309


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = +3

Query: 66  VKENVSNEKFYLYLLFCCGSCRL 134
           +KEN+   ++++Y+      C L
Sbjct: 287 IKENLEQSRYFIYMFVSVWKCLL 309


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = +3

Query: 66  VKENVSNEKFYLYLLFCCGSCRL 134
           +KEN+   ++++Y+      C L
Sbjct: 287 IKENLEQSRYFIYMFVSVWKCLL 309


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +1

Query: 595 FICNHYXLX*XSXPXXLPPFHVP 663
           F+CN+Y       P  LPP   P
Sbjct: 169 FLCNNYPPLPQVPPLPLPPIFPP 191


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 112 FVVAAVGYVTGQHFPT 159
           FV   +GY   QHF T
Sbjct: 421 FVAFTIGYDLNQHFET 436


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = +1

Query: 217 DCENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGKCVPE 336
           D  N  +   +D++   D  +   D  N+R  K    VPE
Sbjct: 122 DASNGNLKFSIDNILKADFGRRITDPINIRKCKPKTVVPE 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,891
Number of Sequences: 336
Number of extensions: 2924
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)