Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_O08
         (904 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0086 - 1064650-1065379,1065796-1065950,1066029-1066141,106...    29   5.1  
11_03_0146 + 10744403-10744603,10745199-10745834,10745967-107461...    29   6.7  
03_03_0247 - 15801705-15802478,15802558-15802728,15802886-15803047     29   6.7  

>10_01_0086 -
           1064650-1065379,1065796-1065950,1066029-1066141,
           1066238-1066345,1066773-1066890,1066996-1067069,
           1067595-1067690,1068062-1068455
          Length = 595

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 15/48 (31%), Positives = 19/48 (39%)
 Frame = -1

Query: 175 HWXPXXRPAARSHHEALRLTPRPSRPGGREPAXLKNAXXHNAKVXKEG 32
           H+ P    A   HH A R  P P  P  R P+    A   +A +   G
Sbjct: 86  HYFPVTEVALALHHAAARQGPPPPPPPPRPPSGSAGAEGDDAAIASGG 133


>11_03_0146 +
           10744403-10744603,10745199-10745834,10745967-10746125,
           10746398-10747036,10748018-10748151,10748281-10748464,
           10748882-10749217,10751659-10751945,10752863-10753253,
           10753351-10753615,10753740-10753818,10754123-10754543
          Length = 1243

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 20/82 (24%), Positives = 40/82 (48%)
 Frame = -3

Query: 659 SLAALVIFIIKAXLMNMAVNEEVGIDLVRSGQVETLAVGSVEARGSKSVDEHASVDPFSH 480
           S+A+ VIF++   L N+    ++G+DL  + +++      V+     + D+ AS D    
Sbjct: 270 SIASCVIFLVVLYLDNILPPRDIGLDLTFTPRIQMFTKDIVDK--LVAADQEASGD---- 323

Query: 479 PARSPHENIEVLSVVEDSEDFD 414
               P  N+  L ++E   ++D
Sbjct: 324 -GTPPFGNLPRLGLLESLAEYD 344


>03_03_0247 - 15801705-15802478,15802558-15802728,15802886-15803047
          Length = 368

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 84  GSRPPGLLGRGVSLSASWWL 143
           GSRP   L RGV   A+WWL
Sbjct: 347 GSRPRAYLSRGVVNWANWWL 366


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,542,955
Number of Sequences: 37544
Number of extensions: 289309
Number of successful extensions: 749
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)