Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_O07
(1088 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 41 0.002
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 41 0.002
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 41 0.002
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 37 0.022
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 37 0.022
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 36 0.038
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 35 0.088
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 34 0.20
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 34 0.20
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 34 0.20
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.20
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.20
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.20
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 32 0.62
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.62
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 32 0.82
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 31 1.4
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 31 1.4
U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical p... 30 2.5
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 30 3.3
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 3.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 3.3
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 4.4
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 4.4
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 29 5.8
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 29 5.8
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 29 5.8
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 5.8
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 7.7
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 7.7
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 40.7 bits (91), Expect = 0.002
Identities = 30/88 (34%), Positives = 30/88 (34%), Gaps = 2/88 (2%)
Frame = +3
Query: 663 NSQAPVXSLGXSLPLIPXXXXPPXAPXXXPXXRHXSXPXTPPXXLXXXX--PPIXXPF*L 836
N AP S G S L P PP P P P PP L PP P
Sbjct: 692 NLSAPSTSAGGSSALPPITGGPPPPPGLPPITG-GPPPPPPPGGLPPITGGPPPPPP--- 747
Query: 837 XPXXYPPXXRXXPXXXPPXGPXXPDPPP 920
P PP P PP G P PPP
Sbjct: 748 -PGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 31.9 bits (69), Expect = 0.82
Identities = 24/74 (32%), Positives = 24/74 (32%)
Frame = +3
Query: 699 LPLIPXXXXPPXAPXXXPXXRHXSXPXTPPXXLXXXXPPIXXPF*LXPXXYPPXXRXXPX 878
LP I PP P P P PP L PPI P PP P
Sbjct: 719 LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL----PPISGG--PPPPPPPPGGCPPPP 772
Query: 879 XXPPXGPXXPDPPP 920
PP G PPP
Sbjct: 773 PPPPPGGFKGGPPP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 40.7 bits (91), Expect = 0.002
Identities = 30/88 (34%), Positives = 30/88 (34%), Gaps = 2/88 (2%)
Frame = +3
Query: 663 NSQAPVXSLGXSLPLIPXXXXPPXAPXXXPXXRHXSXPXTPPXXLXXXX--PPIXXPF*L 836
N AP S G S L P PP P P P PP L PP P
Sbjct: 692 NLSAPSTSAGGSSALPPITGGPPPPPGLPPITG-GPPPPPPPGGLPPITGGPPPPPP--- 747
Query: 837 XPXXYPPXXRXXPXXXPPXGPXXPDPPP 920
P PP P PP G P PPP
Sbjct: 748 -PGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 31.9 bits (69), Expect = 0.82
Identities = 24/74 (32%), Positives = 24/74 (32%)
Frame = +3
Query: 699 LPLIPXXXXPPXAPXXXPXXRHXSXPXTPPXXLXXXXPPIXXPF*LXPXXYPPXXRXXPX 878
LP I PP P P P PP L PPI P PP P
Sbjct: 719 LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL----PPISGG--PPPPPPPPGGCPPPP 772
Query: 879 XXPPXGPXXPDPPP 920
PP G PPP
Sbjct: 773 PPPPPGGFKGGPPP 786
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 40.7 bits (91), Expect = 0.002
Identities = 30/88 (34%), Positives = 30/88 (34%), Gaps = 2/88 (2%)
Frame = +3
Query: 663 NSQAPVXSLGXSLPLIPXXXXPPXAPXXXPXXRHXSXPXTPPXXLXXXX--PPIXXPF*L 836
N AP S G S L P PP P P P PP L PP P
Sbjct: 275 NLSAPSTSAGGSSALPPITGGPPPPPGLPPITG-GPPPPPPPGGLPPITGGPPPPPP--- 330
Query: 837 XPXXYPPXXRXXPXXXPPXGPXXPDPPP 920
P PP P PP G P PPP
Sbjct: 331 -PGGLPPISGGPPPPPPPPGGCPPPPPP 357
Score = 31.9 bits (69), Expect = 0.82
Identities = 24/74 (32%), Positives = 24/74 (32%)
Frame = +3
Query: 699 LPLIPXXXXPPXAPXXXPXXRHXSXPXTPPXXLXXXXPPIXXPF*LXPXXYPPXXRXXPX 878
LP I PP P P P PP L PPI P PP P
Sbjct: 302 LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL----PPISGG--PPPPPPPPGGCPPPP 355
Query: 879 XXPPXGPXXPDPPP 920
PP G PPP
Sbjct: 356 PPPPPGGFKGGPPP 369
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 37.1 bits (82), Expect = 0.022
Identities = 24/87 (27%), Positives = 27/87 (31%), Gaps = 1/87 (1%)
Frame = +1
Query: 634 PXXPPXRXHPTPRXPSXPSXXPSXSYPXSXYLXXPPPXXXPPXTPQXP-XPLLPXSXPXX 810
P PP P P P P P S + PPP P TP P P +P P
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 323
Query: 811 XQSXXRSNSLPXXTPPXXGXXLXXXPP 891
+P PP PP
Sbjct: 324 RFGPPGMGGMPPPPPPGMRYPGGMPPP 350
Score = 30.3 bits (65), Expect = 2.5
Identities = 27/110 (24%), Positives = 31/110 (28%), Gaps = 3/110 (2%)
Frame = +1
Query: 484 PPLTLSGXWTPXXPXLNVXXLXCXLXPXSRTXXPXXSXAXRXPXXSTXKAPXXPPXRXHP 663
PP SG W P P P RT P P + P P
Sbjct: 288 PPPPSSGMWPPPPPP-----------PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPP 336
Query: 664 TP---RXPSXPSXXPSXSYPXSXYLXXPPPXXXPPXTPQXPXPLLPXSXP 804
P R P P YP + PPP P P ++P P
Sbjct: 337 PPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 386
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 37.1 bits (82), Expect = 0.022
Identities = 24/87 (27%), Positives = 27/87 (31%), Gaps = 1/87 (1%)
Frame = +1
Query: 634 PXXPPXRXHPTPRXPSXPSXXPSXSYPXSXYLXXPPPXXXPPXTPQXP-XPLLPXSXPXX 810
P PP P P P P P S + PPP P TP P P +P P
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 333
Query: 811 XQSXXRSNSLPXXTPPXXGXXLXXXPP 891
+P PP PP
Sbjct: 334 RFGPPGMGGMPPPPPPGMRYPGGMPPP 360
Score = 30.3 bits (65), Expect = 2.5
Identities = 27/110 (24%), Positives = 31/110 (28%), Gaps = 3/110 (2%)
Frame = +1
Query: 484 PPLTLSGXWTPXXPXLNVXXLXCXLXPXSRTXXPXXSXAXRXPXXSTXKAPXXPPXRXHP 663
PP SG W P P P RT P P + P P
Sbjct: 298 PPPPSSGMWPPPPPP-----------PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPP 346
Query: 664 TP---RXPSXPSXXPSXSYPXSXYLXXPPPXXXPPXTPQXPXPLLPXSXP 804
P R P P YP + PPP P P ++P P
Sbjct: 347 PPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 396
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 36.3 bits (80), Expect = 0.038
Identities = 27/98 (27%), Positives = 32/98 (32%)
Frame = +1
Query: 484 PPLTLSGXWTPXXPXLNVXXLXCXLXPXSRTXXPXXSXAXRXPXXSTXKAPXXPPXRXHP 663
PP T + T P P P P +P P +P
Sbjct: 315 PPATRAPPATTRAPPATTRPAPASQPPVREPETPDSGYPSPAPQEPAHPSPSYPSPS-YP 373
Query: 664 TPRXPSXPSXXPSXSYPXSXYLXXPPPXXXPPXTPQXP 777
+P PS PS PS SYP Y P PP P+ P
Sbjct: 374 SPSYPS-PSY-PSPSYPSPSYPAEPAYSVPPPAKPEQP 409
Score = 32.3 bits (70), Expect = 0.62
Identities = 30/103 (29%), Positives = 34/103 (33%), Gaps = 1/103 (0%)
Frame = +1
Query: 562 PXSRTXXPXXSXAXRXPXXSTXKAPXXPPXRX-HPTPRXPSXPSXXPSXSYPXSXYLXXP 738
P + P R P P P HP+P PS PS PS SYP Y P
Sbjct: 329 PATTRPAPASQPPVREPETPDSGYPSPAPQEPAHPSPSYPS-PS-YPSPSYPSPSY---P 383
Query: 739 PPXXXPPXTPQXPXPLLPXSXPXXXQSXXRSNSLPXXTPPXXG 867
P P P P S P + S +PP G
Sbjct: 384 SPSYPSPSYPAEP----AYSVPPPAKPEQPSGGYDAPSPPQTG 422
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 35.1 bits (77), Expect = 0.088
Identities = 25/85 (29%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Frame = +3
Query: 669 QAPVXSLGXSLPLIPXXXXPPXAPXXXPXXRHX-SXPXTPPXXLXXXXPPIXXPF*LXPX 845
Q V + L P P AP P +H P PP P P+ P
Sbjct: 74 QHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPP 133
Query: 846 XYPPXXRXXPXXXPPXGPXXPDPPP 920
PP P PP P P PPP
Sbjct: 134 PPPP-----PPHYPPPPPHYPPPPP 153
Score = 30.7 bits (66), Expect = 1.9
Identities = 16/58 (27%), Positives = 18/58 (31%)
Frame = +1
Query: 631 APXXPPXRXHPTPRXPSXPSXXPSXSYPXSXYLXXPPPXXXPPXTPQXPXPLLPXSXP 804
AP P H P P+ P + P PP PP P P P P
Sbjct: 96 APPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPP 153
Score = 29.5 bits (63), Expect = 4.4
Identities = 18/75 (24%), Positives = 22/75 (29%)
Frame = +1
Query: 634 PXXPPXRXHPTPRXPSXPSXXPSXSYPXSXYLXXPPPXXXPPXTPQXPXPLLPXSXPXXX 813
P PP P P S P + P P P P P P P
Sbjct: 24 PQPPPPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPP 83
Query: 814 QSXXRSNSLPXXTPP 858
+ N++P PP
Sbjct: 84 LASYPQNAVPVPAPP 98
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 33.9 bits (74), Expect = 0.20
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +1
Query: 634 PXXPPXRXHPTPRXPSXPSXXPSXSYPXSXYLXXPPPXXXPPXTPQXPXPL 786
P PP P P P P P PPP PP P P P+
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPM 81
Score = 31.9 bits (69), Expect = 0.82
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +1
Query: 646 PXRXHPTPRXPSXPSXXPSXSYPXSXYLXXPPPXXXPPXTPQXPXPLLPXSXP 804
P P P P P P PPP PP P P P+ P P
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
Score = 31.9 bits (69), Expect = 0.82
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +3
Query: 774 PXTPPXXLXXXXPPIXXPF*LXPXXYPPXXRXXPXXXPPXGPXXPDPPP 920
P PP P P P PP P PP P P PPP
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 33.9 bits (74), Expect = 0.20
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = -1
Query: 803 GXEXGRRGXGX*GVXGGWXXGGGXXRXXXXGYEXEGXXEGXDGXLGVG*XRXGGXSG 633
G G G G G GGW GGG G+ G G G G G GG G
Sbjct: 216 GGGGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGGG 272
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 33.9 bits (74), Expect = 0.20
Identities = 29/97 (29%), Positives = 30/97 (30%), Gaps = 1/97 (1%)
Frame = -1
Query: 920 WGGVWXXRPXGGXXXRXXPXXGGVXXGXELERXX-DWXXXGXEXGRRGXGX*GVXGGWXX 744
WGG R GG GG G R DW G G G G G W
Sbjct: 32 WGGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWG-GNGGGRGDWGG 90
Query: 743 GGGXXRXXXXGYEXEGXXEGXDGXLGVG*XRXGGXSG 633
GG R + G G G G G GG G
Sbjct: 91 NGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGG 127
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.20
Identities = 23/99 (23%), Positives = 27/99 (27%)
Frame = +1
Query: 562 PXSRTXXPXXSXAXRXPXXSTXKAPXXPPXRXHPTPRXPSXPSXXPSXSYPXSXYLXXPP 741
P P P T P P P PR S P P P + L P
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 316
Query: 742 PXXXPPXTPQXPXPLLPXSXPXXXQSXXRSNSLPXXTPP 858
PP P P + + S P +PP
Sbjct: 317 AGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 355
Score = 29.5 bits (63), Expect = 4.4
Identities = 23/86 (26%), Positives = 26/86 (30%)
Frame = +1
Query: 634 PXXPPXRXHPTPRXPSXPSXXPSXSYPXSXYLXXPPPXXXPPXTPQXPXPLLPXSXPXXX 813
P PP + P P P+ P PPP P T P P S P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP----PPTGSPPPPPAGGSPPPP- 292
Query: 814 QSXXRSNSLPXXTPPXXGXXLXXXPP 891
R+ S P PP PP
Sbjct: 293 ----RAGSPPPPPPPRGSPPTGSLPP 314
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.20
Identities = 23/99 (23%), Positives = 27/99 (27%)
Frame = +1
Query: 562 PXSRTXXPXXSXAXRXPXXSTXKAPXXPPXRXHPTPRXPSXPSXXPSXSYPXSXYLXXPP 741
P P P T P P P PR S P P P + L P
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 337
Query: 742 PXXXPPXTPQXPXPLLPXSXPXXXQSXXRSNSLPXXTPP 858
PP P P + + S P +PP
Sbjct: 338 AGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 376
Score = 29.5 bits (63), Expect = 4.4
Identities = 23/86 (26%), Positives = 26/86 (30%)
Frame = +1
Query: 634 PXXPPXRXHPTPRXPSXPSXXPSXSYPXSXYLXXPPPXXXPPXTPQXPXPLLPXSXPXXX 813
P PP + P P P+ P PPP P T P P S P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP----PPTGSPPPPPAGGSPPPP- 313
Query: 814 QSXXRSNSLPXXTPPXXGXXLXXXPP 891
R+ S P PP PP
Sbjct: 314 ----RAGSPPPPPPPRGSPPTGSLPP 335
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.20
Identities = 23/99 (23%), Positives = 27/99 (27%)
Frame = +1
Query: 562 PXSRTXXPXXSXAXRXPXXSTXKAPXXPPXRXHPTPRXPSXPSXXPSXSYPXSXYLXXPP 741
P P P T P P P PR S P P P + L P
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 322
Query: 742 PXXXPPXTPQXPXPLLPXSXPXXXQSXXRSNSLPXXTPP 858
PP P P + + S P +PP
Sbjct: 323 AGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 361
Score = 29.5 bits (63), Expect = 4.4
Identities = 23/86 (26%), Positives = 26/86 (30%)
Frame = +1
Query: 634 PXXPPXRXHPTPRXPSXPSXXPSXSYPXSXYLXXPPPXXXPPXTPQXPXPLLPXSXPXXX 813
P PP + P P P+ P PPP P T P P S P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP----PPTGSPPPPPAGGSPPPP- 298
Query: 814 QSXXRSNSLPXXTPPXXGXXLXXXPP 891
R+ S P PP PP
Sbjct: 299 ----RAGSPPPPPPPRGSPPTGSLPP 320
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 32.3 bits (70), Expect = 0.62
Identities = 29/95 (30%), Positives = 29/95 (30%), Gaps = 3/95 (3%)
Frame = -1
Query: 908 WXXRPXGGXXXRXXPXXGGVXXGXELERXXDWXXXGXEXGRRGXGX*---GVXGGWXXGG 738
W P R P GG G W G GR G G G GGW G
Sbjct: 20 WGWGPPSPWGFRPSPFFGGRSGGWG---RPGWGGGGPGWGRGGGGSGWGGGRGGGWGNNG 76
Query: 737 GXXRXXXXGYEXEGXXEGXDGXLGVG*XRXGGXSG 633
G G G G G G G R GG G
Sbjct: 77 GGGNWGGNGGGGNGGG-GRGGGGGGGGGRGGGGGG 110
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 32.3 bits (70), Expect = 0.62
Identities = 21/67 (31%), Positives = 22/67 (32%), Gaps = 2/67 (2%)
Frame = +3
Query: 726 PPXAPXXXPXXRHXSXPXTPPXXLXXXXPPIXXPF*LXPXXYPPXXRXXPXXXPPXGPXX 905
PP P S P PP PP P P PP P PP P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSP----PPRRPPMTPPSPQRRPPRTPPS 177
Query: 906 PDP--PP 920
P+P PP
Sbjct: 178 PEPRNPP 184
Score = 32.3 bits (70), Expect = 0.62
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +1
Query: 661 PTPRXPSXPSXXPSXSYPXSXYLXXPP-PXXXPPXTPQXPXPLLPXSXP 804
P P P P P S P PP P PP TP P P P P
Sbjct: 139 PPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTP 187
Score = 29.9 bits (64), Expect = 3.3
Identities = 19/61 (31%), Positives = 21/61 (34%)
Frame = +1
Query: 610 PXXSTXKAPXXPPXRXHPTPRXPSXPSXXPSXSYPXSXYLXXPPPXXXPPXTPQXPXPLL 789
P + P PP R P PR P P P + P PP TP P P
Sbjct: 139 PPPPPPRVPRTPPPRS-PPPRRPPMTPPSPQRRPPRTP---PSPEPRNPPRTPPSPIPPP 194
Query: 790 P 792
P
Sbjct: 195 P 195
Score = 28.7 bits (61), Expect = 7.7
Identities = 22/85 (25%), Positives = 29/85 (34%), Gaps = 2/85 (2%)
Frame = +1
Query: 610 PXXSTXKAPXXPPXRXHPTPRXPSXPSXXPSXSYPXSXYLXXPPPXXXP--PXTPQXPXP 783
P +A PP + S P P P + PPP P P +PQ P
Sbjct: 113 PQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPP 172
Query: 784 LLPXSXPXXXQSXXRSNSLPXXTPP 858
P S ++ R+ P PP
Sbjct: 173 RTPPS--PEPRNPPRTPPSPIPPPP 195
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 31.9 bits (69), Expect = 0.82
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Frame = +1
Query: 643 PPXRXHPT-PRXPSXPSXXPSXSYPXSXYL-XXPPPXXXPPXTPQXPXPLLPXSXP 804
PP R P P P P P + P + Y+ PP PP P P + P P
Sbjct: 203 PPARSGPPGPPGPKGPRGTPGPTGPKNFYITSGPPGPPGPPGPPGNPGGIGPRGPP 258
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 31.1 bits (67), Expect = 1.4
Identities = 25/85 (29%), Positives = 30/85 (35%), Gaps = 1/85 (1%)
Frame = +3
Query: 666 SQAPVXSLGXSLPLIPXXXXPPXA-PXXXPXXRHXSXPXTPPXXLXXXXPPIXXPF*LXP 842
S P S+ +P +P PP P P R P P + P + P
Sbjct: 131 SGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPR--GYPPAPAPGVYMPPPGM-------P 181
Query: 843 XXYPPXXRXXPXXXPPXGPXXPDPP 917
YPP R PP GP P PP
Sbjct: 182 GAYPPP-RMPIGHGPPGGPPMPGPP 205
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 31.1 bits (67), Expect = 1.4
Identities = 25/85 (29%), Positives = 30/85 (35%), Gaps = 1/85 (1%)
Frame = +3
Query: 666 SQAPVXSLGXSLPLIPXXXXPPXA-PXXXPXXRHXSXPXTPPXXLXXXXPPIXXPF*LXP 842
S P S+ +P +P PP P P R P P + P + P
Sbjct: 131 SGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPR--GYPPAPAPGVYMPPPGM-------P 181
Query: 843 XXYPPXXRXXPXXXPPXGPXXPDPP 917
YPP R PP GP P PP
Sbjct: 182 GAYPPP-RMPIGHGPPGGPPMPGPP 205
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 31.1 bits (67), Expect = 1.4
Identities = 22/59 (37%), Positives = 22/59 (37%)
Frame = -1
Query: 803 GXEXGRRGXGX*GVXGGWXXGGGXXRXXXXGYEXEGXXEGXDGXLGVG*XRXGGXSGAF 627
G GR G G G GG G G GY G G DG G G GG G F
Sbjct: 296 GGRGGRGGFG--GGRGGPMGGRGGFGGDRGGYGGGGGRGGFDGGRGGGGGFRGGDRGGF 352
>U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical
protein B0207.1 protein.
Length = 564
Score = 30.3 bits (65), Expect = 2.5
Identities = 19/61 (31%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Frame = +1
Query: 622 TXKAPXXPPXRXHPTPRXPS--XPSXXPSXSYPXSXYLXXPPPXXXPPXTPQXPXPLLPX 795
T + P P + P PR P P P + PPP PP Q P+LP
Sbjct: 85 TVQEPLPTPVKTPPLPRPPGNLNPVQQPQIPVQRTPPQCPPPPVPHPPQITQM-APILPT 143
Query: 796 S 798
S
Sbjct: 144 S 144
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.9 bits (64), Expect = 3.3
Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = +1
Query: 643 PPXRXHPTPRXPSX-PSXXPSXSYPXSXYLXXPPPXXXPPXTPQXPXPLLPXSXPXXXQ 816
PP P P PS P+ PS P PPP PP P P P Q
Sbjct: 459 PPTTPKPAPPPPSRIPNPSPSPQ-PAEVSKSPPPPPPLPPIATPSSVPPPPPPPPALEQ 516
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 3.3
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +1
Query: 643 PPXRXHPTPRXPSX-PSXXPSXSYPXSXYLXXPPPXXXPP-XTPQXPXPLLPXSXP 804
PP P P PS P+ PS P PPP PP TP P P P
Sbjct: 466 PPTTPKPAPPPPSRIPNPSPSPQ-PAEVSKSPPPPPPLPPIATPSSVPPPPPPPPP 520
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 3.3
Identities = 24/100 (24%), Positives = 31/100 (31%)
Frame = +1
Query: 598 AXRXPXXSTXKAPXXPPXRXHPTPRXPSXPSXXPSXSYPXSXYLXXPPPXXXPPXTPQXP 777
A + P AP + T + P P+ P S P PPP
Sbjct: 504 AQKSPPTPPPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPP------PPPIAGLLAANGTN 557
Query: 778 XPLLPXSXPXXXQSXXRSNSLPXXTPPXXGXXLXXXPPXG 897
P+ P P Q+ + P PP G PP G
Sbjct: 558 VPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPG 597
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.5 bits (63), Expect = 4.4
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = +1
Query: 634 PXXPPXRXHPTPRXPSXP---SXXPSXSYPXSXYLXXPPPXXXPPXTPQXP 777
P PP + P+P+ + P + P P + PPP PP PQ P
Sbjct: 325 PPPPPMKLDPSPQPAATPVEITEIPPIISPPAP--PPPPPPPPPPPPPQTP 373
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.5 bits (63), Expect = 4.4
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +1
Query: 610 PXXSTXKAPXXPPXRXHPTPRXPSXPSXXPSXSYPXSXYLXXPPPXXXPPXTPQXPXP 783
P S P PP P P P+ P PS P PPP P P P P
Sbjct: 74 PRPSPSCCPYVPPAPLPPPP-PPASPCCGPS---PVPAPCCPPPPAPAAPCCPPPPPP 127
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.5 bits (63), Expect = 4.4
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Frame = +1
Query: 661 PTPRXPSXPSXXPSXSYPXSXYLXXPPPXXX--PPXTPQXPXPLLPXSXP 804
PT P P P + P PPP PP P P P P S P
Sbjct: 69 PTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEP 118
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.5 bits (63), Expect = 4.4
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Frame = +1
Query: 661 PTPRXPSXPSXXPSXSYPXSXYLXXPPPXXX--PPXTPQXPXPLLPXSXP 804
PT P P P + P PPP PP P P P P S P
Sbjct: 291 PTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEP 340
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 29.1 bits (62), Expect = 5.8
Identities = 20/75 (26%), Positives = 24/75 (32%)
Frame = +1
Query: 619 STXKAPXXPPXRXHPTPRXPSXPSXXPSXSYPXSXYLXXPPPXXXPPXTPQXPXPLLPXS 798
ST + P PP P P P PS Y PPP P + P +P
Sbjct: 105 STSQPPAFPPPPRPPKPEQYKFP-PAPSVPLLHDRYFVPPPPPVPPRHSRVQQSPPVPIH 163
Query: 799 XPXXXQSXXRSNSLP 843
S +S P
Sbjct: 164 PTPPVSSTPLRHSAP 178
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 29.1 bits (62), Expect = 5.8
Identities = 20/75 (26%), Positives = 24/75 (32%)
Frame = +1
Query: 619 STXKAPXXPPXRXHPTPRXPSXPSXXPSXSYPXSXYLXXPPPXXXPPXTPQXPXPLLPXS 798
ST + P PP P P P PS Y PPP P + P +P
Sbjct: 105 STSQPPAFPPPPRPPKPEQYKFP-PAPSVPLLHDRYFVPPPPPVPPRHSRVQQSPPVPIH 163
Query: 799 XPXXXQSXXRSNSLP 843
S +S P
Sbjct: 164 PTPPVSSTPLRHSAP 178
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 29.1 bits (62), Expect = 5.8
Identities = 16/65 (24%), Positives = 22/65 (33%)
Frame = +1
Query: 610 PXXSTXKAPXXPPXRXHPTPRXPSXPSXXPSXSYPXSXYLXXPPPXXXPPXTPQXPXPLL 789
P + + P PP + HP+ + P + Y P PP T P P
Sbjct: 546 PNLKSHETPPPPPPKGHPSVHLQTPYQHVQPQMIPATYYNLPPQHMAPPPITTSLP-PFC 604
Query: 790 PXSXP 804
S P
Sbjct: 605 DFSQP 609
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 29.1 bits (62), Expect = 5.8
Identities = 16/65 (24%), Positives = 22/65 (33%)
Frame = +1
Query: 610 PXXSTXKAPXXPPXRXHPTPRXPSXPSXXPSXSYPXSXYLXXPPPXXXPPXTPQXPXPLL 789
P + + P PP + HP+ + P + Y P PP T P P
Sbjct: 546 PNLKSHETPPPPPPKGHPSVHLQTPYQHVQPQMIPATYYNLPPQHMAPPPITTSLP-PFC 604
Query: 790 PXSXP 804
S P
Sbjct: 605 DFSQP 609
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.1 bits (62), Expect = 5.8
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = -1
Query: 803 GXEXGRRGXGX*GVXGGWXXGGGXXRXXXXGYEXEGXXEGXDGXLGVG*XRXGGXSG 633
G G G G G GG GGG GY G G G G+G GG G
Sbjct: 106 GGGMGGGGYGGGGYGGGGDGGGGYGGYGGGGY---GGMGGGPGGYGMGGYGGGGGGG 159
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.7 bits (61), Expect = 7.7
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +1
Query: 724 YLXXPPPXXXPPXTPQXPXPLL---PXSXPXXXQSXXRSNSLPXXT 852
Y+ PPP PP P P P L P + R ++LP T
Sbjct: 130 YIEAPPPPPSPPPPPPPPPPQLQQQQVQLPLQDATTLRPSTLPSET 175
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.7 bits (61), Expect = 7.7
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +1
Query: 634 PXXPPXRXHPTPRXPSXPSXXPSXSYPXSXYLXXPPPXXXPPXTPQXP 777
P P P P PS PS S P PP PP P P
Sbjct: 217 PSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPP 264
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,169,266
Number of Sequences: 27780
Number of extensions: 116499
Number of successful extensions: 877
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2929426640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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