Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_O06
(1005 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18076| Best HMM Match : GTP_EFTU (HMM E-Value=0.018) 47 3e-05
SB_51711| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0) 38 0.010
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 33 0.28
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.4
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 30 3.4
SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042) 29 4.5
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 29 5.9
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 5.9
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 29 5.9
SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.9
>SB_18076| Best HMM Match : GTP_EFTU (HMM E-Value=0.018)
Length = 106
Score = 46.8 bits (106), Expect = 3e-05
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +3
Query: 168 KLTTTGHXIYKCGGIEXRTIDKFEE 242
K TTTGH IYKCGGI+ RTI+KFE+
Sbjct: 20 KSTTTGHLIYKCGGIDKRTIEKFEK 44
>SB_51711| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0)
Length = 322
Score = 38.3 bits (85), Expect = 0.010
Identities = 20/44 (45%), Positives = 22/44 (50%)
Frame = +1
Query: 256 MGXGSXKYAXVLDX*RLXXXXXXXXXXALWNSQTXXYYVTXIXA 387
MG GS KYA VLD + ALW +T YYVT I A
Sbjct: 1 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETLKYYVTVIDA 44
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 33.5 bits (73), Expect = 0.28
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = +3
Query: 780 PXNPGXPXXSPPPXXHXPXWHPXTXXAQSXPSXPXPXPXAXHSXTGXXCPPPXXXVSPXP 959
P P P SPPP P P Q P P P P PPP P P
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSP-PPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPP 426
Query: 960 P 962
P
Sbjct: 427 P 427
Score = 32.7 bits (71), Expect = 0.48
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +3
Query: 780 PXNPGXPXXSPPPXXHXPXWHPXTXXAQSXPSXPXPXPXAXHSXTGXXCPPPXXXVSPXP 959
P P P PPP P P P P P P PPP P P
Sbjct: 372 PPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPP 431
Query: 960 P 962
P
Sbjct: 432 P 432
Score = 32.3 bits (70), Expect = 0.64
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = +3
Query: 789 PGXPXXSPPPXXHXPXWHPXTXXAQSXPSXPXPXPXAXHSXTGXXCPPPXXXVSPXPP 962
P P PPP P P P P P P PPP +P PP
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPP 423
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/61 (27%), Positives = 19/61 (31%)
Frame = +3
Query: 780 PXNPGXPXXSPPPXXHXPXWHPXTXXAQSXPSXPXPXPXAXHSXTGXXCPPPXXXVSPXP 959
P P P PPP P P P P P P PPP ++ P
Sbjct: 381 PPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPALRLACAP 440
Query: 960 P 962
P
Sbjct: 441 P 441
Score = 29.5 bits (63), Expect = 4.5
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = +3
Query: 786 NPGXPXXSPPPXXHXPXWHPXTXXAQSXPSXPXPXPXAXHSXTGXXCPPPXXXVSPXPP 962
+P P PPP P P + P P P P PPP P PP
Sbjct: 364 SPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPP-PPPPPPPPPAPP 421
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 31.1 bits (67), Expect = 1.5
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = -3
Query: 892 GLGXGXEGXDWAXXVXGCQXGXCXXGGGDXXGXPGLXGXXFRRSWLFGWG 743
G G G G GC G GGGD G PG G S+ G G
Sbjct: 170 GGGEGGYGMGGGDYSGGCGYGSSYGGGGDYGGGPGYGGGQGYGSYSGGGG 219
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.3 bits (65), Expect = 2.6
Identities = 17/61 (27%), Positives = 18/61 (29%)
Frame = +3
Query: 780 PXNPGXPXXSPPPXXHXPXWHPXTXXAQSXPSXPXPXPXAXHSXTGXXCPPPXXXVSPXP 959
P P PPP + P P T P P G PPP P P
Sbjct: 348 PPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPP 407
Query: 960 P 962
P
Sbjct: 408 P 408
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +3
Query: 810 PPPXXHXPXWHPXTXXAQSXPSXPXPXPXAXHSXTGXXCPPPXXXVSPXPP 962
PPP + P P P P P T PPP P PP
Sbjct: 347 PPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPP 397
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 29.9 bits (64), Expect = 3.4
Identities = 24/99 (24%), Positives = 31/99 (31%), Gaps = 2/99 (2%)
Frame = -3
Query: 1003 GGGRXGPVXXVGXXGGXGETXXXGGGQXXPVXEWXAXGLG--XGXEGXDWAXXVXGCQXG 830
GGGR P G GG G + GGG + G G W+ G
Sbjct: 196 GGGRGAPRGRGGPRGGGGGSGGYGGGSYGGYGNYGGYSQGGYGGYADNSWSGGYGSYDGG 255
Query: 829 XCXXGGGDXXGXPGLXGXXFRRSWLFGWGXXEEGATGRG 713
GGD G + + G + A+G G
Sbjct: 256 --YGNGGDYSNGYSSYGGGYGGGYDSSMGQYSQEASGYG 292
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 29.9 bits (64), Expect = 3.4
Identities = 17/65 (26%), Positives = 21/65 (32%)
Frame = +3
Query: 768 RKXXPXNPGXPXXSPPPXXHXPXWHPXTXXAQSXPSXPXPXPXAXHSXTGXXCPPPXXXV 947
R P P PPP P ++S P P A + PPP
Sbjct: 302 RGAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGA 361
Query: 948 SPXPP 962
+P PP
Sbjct: 362 APPPP 366
>SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042)
Length = 628
Score = 29.5 bits (63), Expect = 4.5
Identities = 29/100 (29%), Positives = 33/100 (33%), Gaps = 3/100 (3%)
Frame = -3
Query: 1003 GGGRXGPVXXVGXXGGXGETXXXGGGQXXPVXEWXAXGLGXGXEGXDWAXXVXGCQXGXC 824
G G G G G G G GQ + G G G G W + G G
Sbjct: 2 GQGPGGWGRGSGGGWGQGPGGGWGRGQGGGMGRGPGGGWGRG-SGGGWGR-MQGGGMGRG 59
Query: 823 XXGGGDXXGXPGLX---GXXFRRSWLFGWGXXEEGATGRG 713
GG G+ G R GWG +EG GRG
Sbjct: 60 PGGGWGRMQGGGMGRGPGGGLGRGPGGGWGRMQEGGMGRG 99
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.5 bits (63), Expect = 4.5
Identities = 17/61 (27%), Positives = 22/61 (36%)
Frame = +3
Query: 780 PXNPGXPXXSPPPXXHXPXWHPXTXXAQSXPSXPXPXPXAXHSXTGXXCPPPXXXVSPXP 959
P P P PP + P +P A + P P P ++ PPP P P
Sbjct: 177 PPYPPPPNPPYPPPPNPP--YPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPPNAPNPPYP 234
Query: 960 P 962
P
Sbjct: 235 P 235
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/58 (25%), Positives = 20/58 (34%)
Frame = +3
Query: 789 PGXPXXSPPPXXHXPXWHPXTXXAQSXPSXPXPXPXAXHSXTGXXCPPPXXXVSPXPP 962
P P PP + P +P + P+ P P P P P +P PP
Sbjct: 175 PPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPPNAPNPP 232
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 29.1 bits (62), Expect = 5.9
Identities = 22/75 (29%), Positives = 23/75 (30%)
Frame = -3
Query: 1003 GGGRXGPVXXVGXXGGXGETXXXGGGQXXPVXEWXAXGLGXGXEGXDWAXXVXGCQXGXC 824
GGG G GG G GGG + G G G D G G
Sbjct: 800 GGGDGGGYGDGDGGGGGGGGGGGGGGDGGGYGDGGGFGDGGGYADGDGGGGGGGGGGGGG 859
Query: 823 XXGGGDXXGXPGLXG 779
GGG G G G
Sbjct: 860 GGGGGGGGGGGGGGG 874
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.1 bits (62), Expect = 5.9
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = +3
Query: 789 PGXPXXSPPPXXHXPXWHPXTXXAQSXPSXPXPXPXAXHSXTGXXCPPPXXXVSPXPP 962
P P PPP P +++ + P P P HS G PPP P PP
Sbjct: 167 PPPPMGKPPPPSGNK---PTFGNSRTSTNGPPPPP---HSRHGSAPPPPERSSGPPPP 218
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.1 bits (62), Expect = 5.9
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = +3
Query: 789 PGXPXXSPPPXXHXPXWHPXTXXAQSXPSXPXPXPXAXHSXTGXXCPPPXXXVSPXPP 962
P P PPP P +++ + P P P HS G PPP P PP
Sbjct: 79 PPPPMGKPPPPSGNK---PTFGNSRTSTNGPPPPP---HSRHGSAPPPPERSSGPPPP 130
>SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = +3
Query: 759 QLLRKXXPXNPGXPXXSPPPXXHXPXWHPXTXXAQSXPSXPXPXPXAXHSXTGXXCPPP 935
+ L P NPG P P P P T P+ P P P T PP
Sbjct: 999 EFLPTSGPTNPGTTTNVPDPLPTDPPTEPPTDPPTPPPTEP-PTPPPTEPPTPPPTDPP 1056
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,658,371
Number of Sequences: 59808
Number of extensions: 234131
Number of successful extensions: 584
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 3003134652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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