Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_O06
(1005 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 64 2e-10
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 64 2e-10
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 64 2e-10
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 64 2e-10
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 47 2e-05
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 35 0.079
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 34 0.14
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 33 0.42
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 31 1.7
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 1.7
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 30 3.0
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 29 5.2
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 5.2
Z72505-6|CAA96613.2| 358|Caenorhabditis elegans Hypothetical pr... 28 9.1
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 28 9.1
AF216966-1|AAF23508.1| 358|Caenorhabditis elegans seven transme... 28 9.1
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 63.7 bits (148), Expect = 2e-10
Identities = 31/55 (56%), Positives = 35/55 (63%)
Frame = +3
Query: 168 KLTTTGHXIYKCGGIEXRTIDKFEEGGXRNGXRILXICXGIGXLKAERERGIXID 332
K TTTGH IYKCGGI+ RTI+KFE+ G + LKAERERGI ID
Sbjct: 20 KSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID 74
Score = 46.0 bits (104), Expect = 4e-05
Identities = 23/50 (46%), Positives = 27/50 (54%)
Frame = +1
Query: 238 KKEAHEMGXGSXKYAXVLDX*RLXXXXXXXXXXALWNSQTXXYYVTXIXA 387
+KEA EMG GS KYA VLD + ALW +T YY+T I A
Sbjct: 43 EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDA 92
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 63.7 bits (148), Expect = 2e-10
Identities = 31/55 (56%), Positives = 35/55 (63%)
Frame = +3
Query: 168 KLTTTGHXIYKCGGIEXRTIDKFEEGGXRNGXRILXICXGIGXLKAERERGIXID 332
K TTTGH IYKCGGI+ RTI+KFE+ G + LKAERERGI ID
Sbjct: 20 KSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID 74
Score = 46.0 bits (104), Expect = 4e-05
Identities = 23/50 (46%), Positives = 27/50 (54%)
Frame = +1
Query: 238 KKEAHEMGXGSXKYAXVLDX*RLXXXXXXXXXXALWNSQTXXYYVTXIXA 387
+KEA EMG GS KYA VLD + ALW +T YY+T I A
Sbjct: 43 EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDA 92
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 63.7 bits (148), Expect = 2e-10
Identities = 31/55 (56%), Positives = 35/55 (63%)
Frame = +3
Query: 168 KLTTTGHXIYKCGGIEXRTIDKFEEGGXRNGXRILXICXGIGXLKAERERGIXID 332
K TTTGH IYKCGGI+ RTI+KFE+ G + LKAERERGI ID
Sbjct: 20 KSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID 74
Score = 46.0 bits (104), Expect = 4e-05
Identities = 23/50 (46%), Positives = 27/50 (54%)
Frame = +1
Query: 238 KKEAHEMGXGSXKYAXVLDX*RLXXXXXXXXXXALWNSQTXXYYVTXIXA 387
+KEA EMG GS KYA VLD + ALW +T YY+T I A
Sbjct: 43 EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDA 92
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 63.7 bits (148), Expect = 2e-10
Identities = 31/55 (56%), Positives = 35/55 (63%)
Frame = +3
Query: 168 KLTTTGHXIYKCGGIEXRTIDKFEEGGXRNGXRILXICXGIGXLKAERERGIXID 332
K TTTGH IYKCGGI+ RTI+KFE+ G + LKAERERGI ID
Sbjct: 20 KSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID 74
Score = 46.0 bits (104), Expect = 4e-05
Identities = 23/50 (46%), Positives = 27/50 (54%)
Frame = +1
Query: 238 KKEAHEMGXGSXKYAXVLDX*RLXXXXXXXXXXALWNSQTXXYYVTXIXA 387
+KEA EMG GS KYA VLD + ALW +T YY+T I A
Sbjct: 43 EKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDA 92
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +3
Query: 168 KLTTTGHXIYKCGGIEXRTIDKFEEGGXRNG 260
K TTTGH IYKCGGI+ RTI+KFE+ G
Sbjct: 20 KSTTTGHLIYKCGGIDKRTIEKFEKEAQEMG 50
Score = 31.5 bits (68), Expect = 0.98
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +1
Query: 238 KKEAHEMGXGSXKYAXVLD 294
+KEA EMG GS KYA VLD
Sbjct: 43 EKEAQEMGKGSFKYAWVLD 61
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 168 KLTTTGHXIYKCGGIEXRTIDKFEEGGXRNGXRILXICXGIGXLKAERERGIXID 332
K T GH ++ ++ RTIDKF+ RNG + + ERERG+ +D
Sbjct: 183 KSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMD 237
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 168 KLTTTGHXIYKCGGIEXRTIDKFEEGGXRNGXRILXICXGIGXLKAERERGIXID 332
K T GH ++ ++ RTIDKF+ RNG + + ERERG+ +D
Sbjct: 201 KSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMD 255
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 35.1 bits (77), Expect = 0.079
Identities = 27/76 (35%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Frame = -3
Query: 1003 GGGRXGPVXXVGXXGGXGETXXXGGGQXXPVXEWXAXGLGXGXEGXDWAXXVXGCQXGX- 827
GGG G G GG G GGG P A G G G G GC G
Sbjct: 26 GGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPP-PACGGGCGGGGGGCGGGGGGCGGGGG 84
Query: 826 CXXGGGDXXGXPGLXG 779
C GGG G G G
Sbjct: 85 CGGGGGGCGGGGGGCG 100
Score = 31.1 bits (67), Expect = 1.3
Identities = 25/72 (34%), Positives = 25/72 (34%)
Frame = -3
Query: 1003 GGGRXGPVXXVGXXGGXGETXXXGGGQXXPVXEWXAXGLGXGXEGXDWAXXVXGCQXGXC 824
GGG G G GG G GGG P A G G G G G G C
Sbjct: 88 GGGGCG-----GGGGGCGGGGGCGGGCAPPPPP-PACGGGCGGGGGGCGGGCGGGGGGGC 141
Query: 823 XXGGGDXXGXPG 788
GGG G G
Sbjct: 142 GGGGGGGCGGGG 153
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 34.3 bits (75), Expect = 0.14
Identities = 19/58 (32%), Positives = 22/58 (37%)
Frame = +3
Query: 789 PGXPXXSPPPXXHXPXWHPXTXXAQSXPSXPXPXPXAXHSXTGXXCPPPXXXVSPXPP 962
P P +PPP P P A+ S P P P + T PPP P PP
Sbjct: 467 PTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIA-TPSSVPPPPPPPPPPPP 523
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical protein
T28C6.1 protein.
Length = 281
Score = 32.7 bits (71), Expect = 0.42
Identities = 32/99 (32%), Positives = 34/99 (34%), Gaps = 2/99 (2%)
Frame = -3
Query: 1003 GGGRXGPVXXVGXXGGX--GETXXXGGGQXXPVXEWXAXGLGXGXEGXDWAXXVXGCQXG 830
GGG+ G G GG GE GG G G +G G Q G
Sbjct: 187 GGGQGGNQGGGGGRGGNQGGEQGGWGGQGGSQGGSQGGSQGGWGNQGGQQGGGRGG-QQG 245
Query: 829 XCXXGGGDXXGXPGLXGXXFRRSWLFGWGXXEEGATGRG 713
GGG G G G R W GWG G GRG
Sbjct: 246 PGGWGGGGRGGGWGGWGRGSR--W--GWGRPSWGGWGRG 280
Score = 31.5 bits (68), Expect = 0.98
Identities = 30/105 (28%), Positives = 31/105 (29%), Gaps = 8/105 (7%)
Frame = -3
Query: 1003 GGGRXGPVXXVGXXGGXGETXXXG---GGQXXPVXEWXAXGLGXGXEGXDWAXXVXGCQX 833
GGGR G G G G G GG W G G W G Q
Sbjct: 57 GGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGW--GGQDGGSSAGGWGGSQGGSQG 114
Query: 832 GXCXXGGG-----DXXGXPGLXGXXFRRSWLFGWGXXEEGATGRG 713
G GG G G G S GWG + G G G
Sbjct: 115 GSSGGWGGSSRSDSGSGQGGWGGQQGGNSNAGGWGGSQGGQNGGG 159
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.98
Identities = 24/75 (32%), Positives = 24/75 (32%)
Frame = -3
Query: 1003 GGGRXGPVXXVGXXGGXGETXXXGGGQXXPVXEWXAXGLGXGXEGXDWAXXVXGCQXGXC 824
GGG P G G G GGG P G G G G G G C
Sbjct: 45 GGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCG-GGGGC 103
Query: 823 XXGGGDXXGXPGLXG 779
GGG G G G
Sbjct: 104 GGGGGGCGGGGGGCG 118
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/72 (30%), Positives = 22/72 (30%)
Frame = -3
Query: 1003 GGGRXGPVXXVGXXGGXGETXXXGGGQXXPVXEWXAXGLGXGXEGXDWAXXVXGCQXGXC 824
GG P G GG G GGG G G G G GC G
Sbjct: 70 GGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGG 129
Query: 823 XXGGGDXXGXPG 788
GGG G G
Sbjct: 130 GCGGGGGGGCGG 141
Score = 29.5 bits (63), Expect = 4.0
Identities = 28/97 (28%), Positives = 33/97 (34%)
Frame = -3
Query: 1003 GGGRXGPVXXVGXXGGXGETXXXGGGQXXPVXEWXAXGLGXGXEGXDWAXXVXGCQXGXC 824
GGG G G GG G GGG + G G G G G G C
Sbjct: 111 GGGGGGCGGGGGGCGGGG--GGCGGGGGGGCGGGSSGGCGGGSSG-----GCGGGGGGGC 163
Query: 823 XXGGGDXXGXPGLXGXXFRRSWLFGWGXXEEGATGRG 713
GGG G G + + G G G++G G
Sbjct: 164 GGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGG 200
Score = 29.5 bits (63), Expect = 4.0
Identities = 25/97 (25%), Positives = 30/97 (30%)
Frame = -3
Query: 1003 GGGRXGPVXXVGXXGGXGETXXXGGGQXXPVXEWXAXGLGXGXEGXDWAXXVXGCQXGXC 824
GGG G G G G + GGG G G G G G
Sbjct: 125 GGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVA 184
Query: 823 XXGGGDXXGXPGLXGXXFRRSWLFGWGXXEEGATGRG 713
GGG G G + + G G G++G G
Sbjct: 185 PSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGGG 221
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.98
Identities = 24/75 (32%), Positives = 24/75 (32%)
Frame = -3
Query: 1003 GGGRXGPVXXVGXXGGXGETXXXGGGQXXPVXEWXAXGLGXGXEGXDWAXXVXGCQXGXC 824
GGG P G G G GGG P G G G G G G C
Sbjct: 45 GGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCG-GGGGC 103
Query: 823 XXGGGDXXGXPGLXG 779
GGG G G G
Sbjct: 104 GGGGGGCGGGGGGCG 118
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/72 (30%), Positives = 22/72 (30%)
Frame = -3
Query: 1003 GGGRXGPVXXVGXXGGXGETXXXGGGQXXPVXEWXAXGLGXGXEGXDWAXXVXGCQXGXC 824
GG P G GG G GGG G G G G GC G
Sbjct: 70 GGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGG 129
Query: 823 XXGGGDXXGXPG 788
GGG G G
Sbjct: 130 GCGGGGGGGCGG 141
Score = 29.5 bits (63), Expect = 4.0
Identities = 28/97 (28%), Positives = 33/97 (34%)
Frame = -3
Query: 1003 GGGRXGPVXXVGXXGGXGETXXXGGGQXXPVXEWXAXGLGXGXEGXDWAXXVXGCQXGXC 824
GGG G G GG G GGG + G G G G G G C
Sbjct: 111 GGGGGGCGGGGGGCGGGG--GGCGGGGGGGCGGGSSGGCGGGSSG-----GCGGGGGGGC 163
Query: 823 XXGGGDXXGXPGLXGXXFRRSWLFGWGXXEEGATGRG 713
GGG G G + + G G G++G G
Sbjct: 164 GGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGG 200
Score = 29.5 bits (63), Expect = 4.0
Identities = 25/97 (25%), Positives = 30/97 (30%)
Frame = -3
Query: 1003 GGGRXGPVXXVGXXGGXGETXXXGGGQXXPVXEWXAXGLGXGXEGXDWAXXVXGCQXGXC 824
GGG G G G G + GGG G G G G G
Sbjct: 125 GGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVA 184
Query: 823 XXGGGDXXGXPGLXGXXFRRSWLFGWGXXEEGATGRG 713
GGG G G + + G G G++G G
Sbjct: 185 PSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGGG 221
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/58 (31%), Positives = 21/58 (36%)
Frame = +3
Query: 789 PGXPXXSPPPXXHXPXWHPXTXXAQSXPSXPXPXPXAXHSXTGXXCPPPXXXVSPXPP 962
P P +PPP P P A+ S P P P + PPP P PP
Sbjct: 460 PTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPP-----PPPP 512
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical protein
C34D4.11 protein.
Length = 136
Score = 30.7 bits (66), Expect = 1.7
Identities = 29/96 (30%), Positives = 30/96 (31%)
Frame = -3
Query: 1000 GGRXGPVXXVGXXGGXGETXXXGGGQXXPVXEWXAXGLGXGXEGXDWAXXVXGCQXGXCX 821
GGR G G GG GGG G G G +W G G
Sbjct: 37 GGRSGGWGRPGWGGGGPGWGRGGGGSGWGGGR--GGGWGNNGGGGNWGGNGGGGNGGGGR 94
Query: 820 XGGGDXXGXPGLXGXXFRRSWLFGWGXXEEGATGRG 713
GGG G G G R G G G GRG
Sbjct: 95 GGGGGGGGGRG-GGGGGRGGGGGGGGGRGGGGGGRG 129
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.9 bits (64), Expect = 3.0
Identities = 24/87 (27%), Positives = 27/87 (31%)
Frame = -3
Query: 1003 GGGRXGPVXXVGXXGGXGETXXXGGGQXXPVXEWXAXGLGXGXEGXDWAXXVXGCQXGXC 824
GGG G G GG G GGG G+G G G G
Sbjct: 111 GGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGM 170
Query: 823 XXGGGDXXGXPGLXGXXFRRSWLFGWG 743
GG G G G F + G+G
Sbjct: 171 GGGGYGGGGDGGYGGGGFGGGGMGGYG 197
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 768 RKXXPXNPGXPXXSPPPXXHXPXWHPXTXXAQSXPSXPXPXP 893
R P P P PPP P WH P P P P
Sbjct: 48 RGPPPFGPPPPWDRPPPPWRRPPWHRRPPWG-LPPPPPPPEP 88
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +3
Query: 780 PXNPGXPXXSPPPXXHXPXWHPXTXXAQSXPSXPXP 887
P NPG P P P W P P P P
Sbjct: 126 PGNPGRPPQQPCEPITPPPWKPCPQGPPGPPGPPGP 161
>Z72505-6|CAA96613.2| 358|Caenorhabditis elegans Hypothetical
protein C50C10.7 protein.
Length = 358
Score = 28.3 bits (60), Expect = 9.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 183 GHXIYKCGGIEXRTIDKFEEGGXRNGXRILXICXGI 290
GH IY+ G I+ + K+ G ++ IL C GI
Sbjct: 111 GHFIYRYGAIDSQFYQKYLSGFKQSLLYILPFCYGI 146
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical protein
C27H5.3 protein.
Length = 448
Score = 28.3 bits (60), Expect = 9.1
Identities = 24/72 (33%), Positives = 27/72 (37%)
Frame = -3
Query: 1003 GGGRXGPVXXVGXXGGXGETXXXGGGQXXPVXEWXAXGLGXGXEGXDWAXXVXGCQXGXC 824
GGGR GP+ G GG GGG+ G G G G D G + G
Sbjct: 305 GGGRGGPMGGRGGFGGDRGGYGGGGGRG---GFDGGRGGGGGFRGGDRGGFRGGDRGG-- 359
Query: 823 XXGGGDXXGXPG 788
GGD G G
Sbjct: 360 -FRGGDRGGFRG 370
>AF216966-1|AAF23508.1| 358|Caenorhabditis elegans seven
transmembrane receptor 2 protein.
Length = 358
Score = 28.3 bits (60), Expect = 9.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 183 GHXIYKCGGIEXRTIDKFEEGGXRNGXRILXICXGI 290
GH IY+ G I+ + K+ G ++ IL C GI
Sbjct: 111 GHFIYRYGAIDSQFYQKYLSGFKQSLLYILPFCYGI 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,522,390
Number of Sequences: 27780
Number of extensions: 187677
Number of successful extensions: 605
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 556
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2636483976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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