Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_O05
(900 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical p... 114 7e-26
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 33 0.28
AF101316-3|AAC69232.2| 508|Caenorhabditis elegans Hypothetical ... 29 3.4
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 29 6.0
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 29 6.0
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 29 6.0
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p... 28 7.9
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p... 28 7.9
U40958-3|ABQ13075.1| 219|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical
protein F25H2.11 protein.
Length = 181
Score = 114 bits (275), Expect = 7e-26
Identities = 53/113 (46%), Positives = 77/113 (68%), Gaps = 2/113 (1%)
Frame = +1
Query: 130 MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEA--DEGT 303
M IYKDI T DE+ SD++ MKLVD+++YE G+ V R +G+I + G NPSAEE D+G+
Sbjct: 1 MLIYKDIFTDDELSSDSFPMKLVDDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGS 60
Query: 304 DSAVESGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVEV 462
D VE G+DIVLNH+LVE + D + Y+K +MK ++ +E+ D+ +V
Sbjct: 61 DEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADV 113
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +3
Query: 513 RNFXFFTGESMDC---DGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 644
+N FF GE +G VA++EYRD DGT++P +M K + EEK
Sbjct: 134 KNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLMLVKEAIIEEK 180
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 33.1 bits (72), Expect = 0.28
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
Frame = +1
Query: 163 EMFSDTYKMKLVDEVIYEVTG-----RLVTRAQGDIQIEGFNPSAEEADEGTDSAVESGV 327
E+ S TY +K+ E +++ G RL+ +E S D+ +
Sbjct: 343 ELTSHTYSLKVGGERVWDYAGDNYVHRLIENGADGKLVEYQRESNASFDDKNQKGGDKLE 402
Query: 328 DIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVE 459
I L + L+ T D++ Y L+ M++ ++K+E+ A QVE
Sbjct: 403 GIKLEYTLLLTSQLEDQRKYFEGLRHDMEQTMSKMEKTAYAQVE 446
>AF101316-3|AAC69232.2| 508|Caenorhabditis elegans Hypothetical
protein F52F10.2 protein.
Length = 508
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 483 FVHVCFKYFNLVRRLLFQFCY*FFHI 406
F+++C +Y RR L FCY F I
Sbjct: 137 FIYLCIEYLPTGRRYLMMFCYILFDI 162
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 376 KKSYTLYLKDYMKKLVAKLEEK 441
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 376 KKSYTLYLKDYMKKLVAKLEEK 441
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 376 KKSYTLYLKDYMKKLVAKLEEK 441
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 268 FNPSAEEADEGTDSAVESG-VDIVLNH 345
F+PSA +ADE D A E G VD L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262
>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 268 FNPSAEEADEGTDSAVESG-VDIVLNH 345
F+PSA +ADE D A E G VD L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262
>U40958-3|ABQ13075.1| 219|Caenorhabditis elegans Hypothetical
protein F09F9.5 protein.
Length = 219
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 435 FQFCY*FFHIVFEVQCVGFLVTEGVCF 355
+Q C+ F H+ +GF GVCF
Sbjct: 53 YQTCFGFMHVKIATCSIGFFALLGVCF 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,766,622
Number of Sequences: 27780
Number of extensions: 329357
Number of successful extensions: 894
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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