Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_O04
         (880 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical pr...   311   5e-85
AF045646-7|AAK29833.2|  321|Caenorhabditis elegans Hypothetical ...    37   0.022
Z83238-4|CAB05795.1|  341|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z81589-11|CAI58924.1|  330|Caenorhabditis elegans Hypothetical p...    28   7.7  
Z81555-8|CAB04512.2|  330|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical
           protein B0250.1 protein.
          Length = 260

 Score =  311 bits (763), Expect = 5e-85
 Identities = 131/181 (72%), Positives = 158/181 (87%)
 Frame = +1

Query: 193 YAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKK 372
           YAERHGYIKG+VKDIIHDPGRGAPLA++ FRDPYK+KT K   +A EG++TGQF++CG K
Sbjct: 34  YAERHGYIKGLVKDIIHDPGRGAPLAIIAFRDPYKYKTVKTTVVAAEGMHTGQFIHCGAK 93

Query: 373 ATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 552
           A +++GN++PVG +PEGT +CN+E K GDRG +ARASGN+ATVI HNPD K+TR++LPSG
Sbjct: 94  AQIQIGNIVPVGTLPEGTTICNVENKSGDRGVIARASGNYATVIAHNPDTKKTRIRLPSG 153

Query: 553 AKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVXHPHGG 732
           AKKV+ S NR M+G+VAGGGR DKP+LKAGR+YHKYK KRN WP VRGVAMNPV HPHGG
Sbjct: 154 AKKVVQSVNRAMIGLVAGGGRTDKPLLKAGRSYHKYKAKRNSWPRVRGVAMNPVEHPHGG 213

Query: 733 G 735
           G
Sbjct: 214 G 214



 Score = 40.3 bits (90), Expect = 0.002
 Identities = 18/25 (72%), Positives = 19/25 (76%)
 Frame = +3

Query: 114 QRKGAGSVFVSHTKKRKGAPKLRSL 188
           QRKGAG +F SH K RKGA KLR L
Sbjct: 8   QRKGAGGIFKSHNKHRKGASKLRPL 32


>AF045646-7|AAK29833.2|  321|Caenorhabditis elegans Hypothetical
           protein F56B3.8 protein.
          Length = 321

 Score = 36.7 bits (81), Expect = 0.022
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
 Frame = +1

Query: 388 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 564
           GN  P+G++  GT++ ++E     D     +A+G  AT++ H  D   T VKLP   +  
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLPHKHEFS 217

Query: 565 LPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVK 669
           L  +    VG ++    ID  I  + + + ++  K
Sbjct: 218 LHRTCMATVGRLSHAD-IDGKIFGSAQMHRRFGYK 251


>Z83238-4|CAB05795.1|  341|Caenorhabditis elegans Hypothetical
           protein T08G3.5 protein.
          Length = 341

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/63 (25%), Positives = 32/63 (50%)
 Frame = +1

Query: 136 FSFLTRRRGKALLNFAL*XYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKE 315
           +S +T+    AL N ++  ++  HG    +V  ++H P R A L ++  +   K  T  +
Sbjct: 263 YSAVTKNLDIALTNISMICFST-HGLFSTIVMLVVHKPYRQATLQILKIKRIEKIGTANK 321

Query: 316 LFI 324
           +F+
Sbjct: 322 VFL 324


>Z81589-11|CAI58924.1|  330|Caenorhabditis elegans Hypothetical
           protein F58E10.6 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 205 HGYIKGVVKDIIHDPGRGAPLAVVHFR 285
           HG +  +V  I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311


>Z81555-8|CAB04512.2|  330|Caenorhabditis elegans Hypothetical
           protein F58E10.6 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 205 HGYIKGVVKDIIHDPGRGAPLAVVHFR 285
           HG +  +V  I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311


>Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical
           protein T24B8.1 protein.
          Length = 134

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +1

Query: 502 IGHNPDAKRTRVKLPSGAKKVL 567
           IGH  D +RTR  LP+G KKVL
Sbjct: 57  IGHGSD-RRTRFVLPNGYKKVL 77


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,130,735
Number of Sequences: 27780
Number of extensions: 428658
Number of successful extensions: 1030
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)