Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_O01
         (910 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          24   1.9  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    24   1.9  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           24   1.9  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 225 LPPRTYSPSEXHIIEQNVEPRRS 293
           LPP TY PS+ +  + N  P  S
Sbjct: 42  LPPITYPPSDWNCPQYNAPPYMS 64


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +3

Query: 423 PALQGYRRCLRPYPQGSRGLLSFWRGNFANVIRY-FPTQALNFAFKDKYKQ 572
           P +  YR C RPYP  ++    +W G  +   +Y F      ++F  + K+
Sbjct: 251 PYVPFYRYCYRPYPVYNQ----WWSGPLSMYYQYPFGLPEYEYSFYQEVKK 297


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 225 LPPRTYSPSEXHIIEQNVEPRRS 293
           LPP TY PS+ +  + N  P  S
Sbjct: 33  LPPITYPPSDWNCPQYNAPPYMS 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,990
Number of Sequences: 336
Number of extensions: 2846
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25341085
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)