Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_N24
(898 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative ... 198 3e-51
At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative ... 195 3e-50
At5g47720.3 68418.m05894 acetyl-CoA C-acyltransferase, putative ... 187 1e-47
At5g47720.2 68418.m05896 acetyl-CoA C-acyltransferase, putative ... 187 1e-47
At5g47720.1 68418.m05893 acetyl-CoA C-acyltransferase, putative ... 187 1e-47
At5g47720.4 68418.m05895 acetyl-CoA C-acyltransferase, putative ... 186 1e-47
At2g33150.1 68415.m04062 acetyl-CoA C-acyltransferase, putative ... 77 2e-14
At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 / 3-keto... 76 3e-14
At5g48880.1 68418.m06046 acetyl-CoA C-acyltransferase 1 / 3-keto... 76 3e-14
At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative ... 72 5e-13
At2g04540.1 68415.m00460 3-oxoacyl-[acyl-carrier-protein] syntha... 30 2.4
At3g53680.1 68416.m05928 PHD finger transcription factor, putati... 29 4.2
At5g48120.1 68418.m05944 expressed protein low similarity to MMS... 29 5.5
At4g24970.1 68417.m03578 ATP-binding region, ATPase-like domain-... 29 5.5
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 28 7.3
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 28 7.3
At2g34710.1 68415.m04263 homeobox-leucine zipper transcription f... 28 9.7
>At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 403
Score = 198 bits (484), Expect = 3e-51
Identities = 106/218 (48%), Positives = 131/218 (60%), Gaps = 2/218 (0%)
Frame = +3
Query: 168 MAAFSTKVSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEV 347
MA S V+ +V I RTPM + AA++RA + ++EV
Sbjct: 1 MAHTSESVNPRDVCIVGVARTPMGGFLGSLSSLPATKLGSLAIAAALKRANVDPALVQEV 60
Query: 348 YIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIIL 527
GNV SANLGQAPARQA + AG+P S ICTTVNKVCASGMK++M+AAQ +Q G D+++
Sbjct: 61 VFGNVLSANLGQAPARQAALGAGIPNSVICTTVNKVCASGMKAVMIAAQSIQLGINDVVV 120
Query: 528 AGGMESMSNVPFYL--KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAQKLQIT 701
AGGMESMSN P YL R + +G LVDG++ DGL DVYN MG+CAE A+K QIT
Sbjct: 121 AGGMESMSNTPKYLAEARKGSRFGHDSLVDGMLKDGLWDVYNDCGMGSCAELCAEKFQIT 180
Query: 702 RXDQDXYAVHSYXRSXXXXXXXXFVDELVPVPVPXKEG 815
R QD YAV S+ R F E+VPV V G
Sbjct: 181 REQQDDYAVQSFERGIAAQEAGAFTWEIVPVEVSGGRG 218
>At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 398
Score = 195 bits (476), Expect = 3e-50
Identities = 103/211 (48%), Positives = 128/211 (60%), Gaps = 2/211 (0%)
Frame = +3
Query: 189 VSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCS 368
V ++V I RTPM + AA++RA + ++EV GNV S
Sbjct: 3 VDESDVCIVGVARTPMGGFLGSLSSLPATKLGSLAIAAALKRANVDPALVQEVVFGNVLS 62
Query: 369 ANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESM 548
ANLGQAPARQA + AG+P S ICTTVNKVCASGMK++M+AAQ +Q G D+++AGGMESM
Sbjct: 63 ANLGQAPARQAALGAGIPNSVICTTVNKVCASGMKAVMIAAQSIQLGINDVVVAGGMESM 122
Query: 549 SNVPFYL--KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAQKLQITRXDQDXY 722
SN P YL R + +G LVDG++ DGL DVYN MG+CAE A+K QITR QD Y
Sbjct: 123 SNTPKYLAEARKGSRFGHDSLVDGMLKDGLWDVYNDCGMGSCAELCAEKFQITREQQDDY 182
Query: 723 AVHSYXRSXXXXXXXXFVDELVPVPVPXKEG 815
AV S+ R F E+VPV V G
Sbjct: 183 AVQSFERGIAAQEAGAFTWEIVPVEVSGGRG 213
>At5g47720.3 68418.m05894 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 405
Score = 187 bits (455), Expect = 1e-47
Identities = 97/217 (44%), Positives = 130/217 (59%), Gaps = 2/217 (0%)
Frame = +3
Query: 201 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLG 380
+V + RTP+ + AA++RA + ++EV+ GNV +ANLG
Sbjct: 14 DVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVLTANLG 73
Query: 381 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 560
QAPARQA + AG+P S ICTT+NKVCA+GMKS+MLA+Q +Q G DI++AGGMESMSNVP
Sbjct: 74 QAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVP 133
Query: 561 FYL--KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAQKLQITRXDQDXYAVHS 734
YL R + G +VDG++ DGL DVYN F MG C E A + +ITR +QD YA+ S
Sbjct: 134 KYLPDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRITREEQDAYAIQS 193
Query: 735 YXRSXXXXXXXXFVDELVPVPVPXKEGLLLIFAEDEE 845
+ R F E+VPV V G + + +E
Sbjct: 194 FERGIAAQNTQLFAWEIVPVEVSTGRGRPSVVIDKDE 230
>At5g47720.2 68418.m05896 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 415
Score = 187 bits (455), Expect = 1e-47
Identities = 97/217 (44%), Positives = 130/217 (59%), Gaps = 2/217 (0%)
Frame = +3
Query: 201 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLG 380
+V + RTP+ + AA++RA + ++EV+ GNV +ANLG
Sbjct: 14 DVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVLTANLG 73
Query: 381 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 560
QAPARQA + AG+P S ICTT+NKVCA+GMKS+MLA+Q +Q G DI++AGGMESMSNVP
Sbjct: 74 QAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVP 133
Query: 561 FYL--KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAQKLQITRXDQDXYAVHS 734
YL R + G +VDG++ DGL DVYN F MG C E A + +ITR +QD YA+ S
Sbjct: 134 KYLPDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRITREEQDAYAIQS 193
Query: 735 YXRSXXXXXXXXFVDELVPVPVPXKEGLLLIFAEDEE 845
+ R F E+VPV V G + + +E
Sbjct: 194 FERGIAAQNTQLFAWEIVPVEVSTGRGRPSVVIDKDE 230
>At5g47720.1 68418.m05893 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 405
Score = 187 bits (455), Expect = 1e-47
Identities = 97/217 (44%), Positives = 130/217 (59%), Gaps = 2/217 (0%)
Frame = +3
Query: 201 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLG 380
+V + RTP+ + AA++RA + ++EV+ GNV +ANLG
Sbjct: 14 DVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVLTANLG 73
Query: 381 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 560
QAPARQA + AG+P S ICTT+NKVCA+GMKS+MLA+Q +Q G DI++AGGMESMSNVP
Sbjct: 74 QAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVP 133
Query: 561 FYL--KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAQKLQITRXDQDXYAVHS 734
YL R + G +VDG++ DGL DVYN F MG C E A + +ITR +QD YA+ S
Sbjct: 134 KYLPDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRITREEQDAYAIQS 193
Query: 735 YXRSXXXXXXXXFVDELVPVPVPXKEGLLLIFAEDEE 845
+ R F E+VPV V G + + +E
Sbjct: 194 FERGIAAQNTQLFAWEIVPVEVSTGRGRPSVVIDKDE 230
>At5g47720.4 68418.m05895 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 406
Score = 186 bits (454), Expect = 1e-47
Identities = 97/218 (44%), Positives = 130/218 (59%), Gaps = 3/218 (1%)
Frame = +3
Query: 201 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLG 380
+V + RTP+ + AA++RA + ++EV+ GNV +ANLG
Sbjct: 14 DVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVLTANLG 73
Query: 381 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 560
QAPARQA + AG+P S ICTT+NKVCA+GMKS+MLA+Q +Q G DI++AGGMESMSNVP
Sbjct: 74 QAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVP 133
Query: 561 FYL---KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAQKLQITRXDQDXYAVH 731
YL R + G +VDG++ DGL DVYN F MG C E A + +ITR +QD YA+
Sbjct: 134 KYLPDASRRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRITREEQDAYAIQ 193
Query: 732 SYXRSXXXXXXXXFVDELVPVPVPXKEGLLLIFAEDEE 845
S+ R F E+VPV V G + + +E
Sbjct: 194 SFERGIAAQNTQLFAWEIVPVEVSTGRGRPSVVIDKDE 231
>At2g33150.1 68415.m04062 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative similar to
3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from
[Arabidopsis thaliana] GI:2981616, [Cucumis sativus]
GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621;
contains InterPro accession IPR002155: Thiolase
Length = 462
Score = 77.0 bits (181), Expect = 2e-14
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 2/201 (0%)
Frame = +3
Query: 198 NEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXV-NAAIERAGIPKEEIKEVYIGNVCSAN 374
++VVI +A RTP+ V A IE+ + E+ ++ +G V +
Sbjct: 50 DDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPG 109
Query: 375 LGQAP-ARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMS 551
+A R A +AG P++ TVN+ C+SG++++ A ++ G DI + G+ESM+
Sbjct: 110 SQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 169
Query: 552 NVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAQKLQITRXDQDXYAVH 731
P ++ G V+ V MG +EN AQ+ ++R +QD AV
Sbjct: 170 TNPM-------AWEGS--VNPAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVD 220
Query: 732 SYXRSXXXXXXXXFVDELVPV 794
S+ ++ F DE++PV
Sbjct: 221 SHRKAAAATAAGKFKDEIIPV 241
>At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 /
3-ketoacyl-CoA thiolase 1 (PKT1) identical to
3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana]
GI:3169568
Length = 457
Score = 76.2 bits (179), Expect = 3e-14
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 2/201 (0%)
Frame = +3
Query: 198 NEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXV-NAAIERAGIPKEEIKEVYIGNVCSAN 374
+++VI +A RT + V A +ER + E+ ++ +G V +
Sbjct: 49 DDIVIVAAYRTAICKARRGGFKDTLPDDLLASVLKAVVERTSLDPSEVGDIVVGTVIAPG 108
Query: 375 LGQA-PARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMS 551
+A R A FAG P S TVN+ C+SG++++ A ++ G DI + G+ESMS
Sbjct: 109 SQRAMECRVAAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMS 168
Query: 552 NVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAQKLQITRXDQDXYAVH 731
++ G + D F D MG +EN A++ +TR +QD AV
Sbjct: 169 T--DHIPGGGFHGSNPRAQD---FPKARDCL--LPMGITSENVAERFGVTREEQDMAAVE 221
Query: 732 SYXRSXXXXXXXXFVDELVPV 794
S+ R+ DE++PV
Sbjct: 222 SHKRAAAAIASGKLKDEIIPV 242
>At5g48880.1 68418.m06046 acetyl-CoA C-acyltransferase 1 /
3-ketoacyl-CoA thiolase 1 (PKT1) identical to
3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana]
GI:3169568
Length = 414
Score = 76.2 bits (179), Expect = 3e-14
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 2/201 (0%)
Frame = +3
Query: 198 NEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXV-NAAIERAGIPKEEIKEVYIGNVCSAN 374
+++VI +A RT + V A +ER + E+ ++ +G V +
Sbjct: 6 DDIVIVAAYRTAICKARRGGFKDTLPDDLLASVLKAVVERTSLDPSEVGDIVVGTVIAPG 65
Query: 375 LGQA-PARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMS 551
+A R A FAG P S TVN+ C+SG++++ A ++ G DI + G+ESMS
Sbjct: 66 SQRAMECRVAAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMS 125
Query: 552 NVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAQKLQITRXDQDXYAVH 731
++ G + D F D MG +EN A++ +TR +QD AV
Sbjct: 126 T--DHIPGGGFHGSNPRAQD---FPKARDCL--LPMGITSENVAERFGVTREEQDMAAVE 178
Query: 732 SYXRSXXXXXXXXFVDELVPV 794
S+ R+ DE++PV
Sbjct: 179 SHKRAAAAIASGKLKDEIIPV 199
>At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative similar to
3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from
[Arabidopsis thaliana] GI:2981616, [Cucumis sativus]
GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621;
contains InterPro accession IPR002155: Thiolase
Length = 443
Score = 72.1 bits (169), Expect = 5e-13
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 2/201 (0%)
Frame = +3
Query: 198 NEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXV-NAAIERAGIPKEEIKEVYIGNVCSAN 374
++VVI +A RT + V A IE+ + E+ ++ +G V
Sbjct: 42 DDVVIVAAQRTALCKAKRGSFKDTFPDELLASVLRALIEKTNVNPSEVGDIVVGTVLGPG 101
Query: 375 LGQAP-ARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMS 551
+A R A +AG P++ TVN+ C+SG++++ A ++ G DI + G+ESM+
Sbjct: 102 SQRASECRMAAFYAGFPETVPIRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 161
Query: 552 NVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAQKLQITRXDQDXYAVH 731
P RG + G + F+ + MG +EN A + ++R +QD AV
Sbjct: 162 TNP----RG---WKGSVNPNVKKFEQAHNCL--LPMGITSENVAHRFNVSREEQDQAAVD 212
Query: 732 SYXRSXXXXXXXXFVDELVPV 794
S+ ++ F DE+ PV
Sbjct: 213 SHRKAASATASGKFKDEITPV 233
>At2g04540.1 68415.m00460 3-oxoacyl-[acyl-carrier-protein] synthase
II, putative similar to Swiss-Prot:P56902
3-oxoacyl-[acyl-carrier-protein] synthase II (EC
2.3.1.41) (Beta- ketoacyl-ACP synthase II) (KAS II)
[Rhizobium meliloti]
Length = 461
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 456 CASGMKSIMLAAQGLQTGAQDIILAGGMES 545
CA+G SI A + +Q G D+++AGG ES
Sbjct: 209 CATGAHSIGDATRMIQFGDADVMVAGGTES 238
>At3g53680.1 68416.m05928 PHD finger transcription factor, putative
predicted proteins, Arabidopsis thaliana
Length = 839
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +2
Query: 353 WQCLFCKFGPSTCKTSCNICRFAKKYHMYNCKQSMCLWHEIYNVG--STRSTNWS 511
W C C GP TSC I + Y +N ++ + H Y++ S RS ++S
Sbjct: 523 WYCSSCNDGP----TSCKIATASWLYTYFNLNANILVLHSAYSLSPISDRSHDFS 573
>At5g48120.1 68418.m05944 expressed protein low similarity to MMS19
[Mus musculus] GI:14029390
Length = 1152
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +3
Query: 414 GLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPFYLKRGETSYG 593
GLP I ++VC++G K + QGL+ + +ES FYL+ G
Sbjct: 605 GLPYQMILEATSEVCSTGPKYVEKMVQGLEEAFCSSLSDFYIESFLVSNFYLETTCQVNG 664
Query: 594 GMQLVD 611
+ +D
Sbjct: 665 NFESID 670
>At4g24970.1 68417.m03578 ATP-binding region, ATPase-like
domain-containing protein low similarity to microrchidia
[Mus musculus] GI:5410255; contains Pfam profile
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein
Length = 707
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 525 LAGGMESMSNVPFYLKRGETSYGGMQLVD 611
+AGG+E + N LKRG ++GG VD
Sbjct: 44 VAGGLEKVGNNFVGLKRGRDTFGGSSEVD 72
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/19 (63%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
Frame = -1
Query: 628 PSNTIPSTNC-IPPYEVSP 575
PS+T PS+NC PPY+ SP
Sbjct: 49 PSHTPPSSNCGSPPYDPSP 67
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/19 (63%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
Frame = -1
Query: 628 PSNTIPSTNC-IPPYEVSP 575
PS+T PS+NC PPY+ SP
Sbjct: 49 PSHTPPSSNCGSPPYDPSP 67
>At2g34710.1 68415.m04263 homeobox-leucine zipper transcription
factor (HB-14) identical to homeodomain transcription
factor (ATHB-14)GP:3132474 GB:Y11122 [Arabidopsis
thaliana];
Length = 852
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 506 WSPRYNTCWWDGIYVKC 556
W+ RY+TC DG YV C
Sbjct: 284 WTLRYSTCLEDGSYVVC 300
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,207,142
Number of Sequences: 28952
Number of extensions: 321295
Number of successful extensions: 836
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2110422216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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