Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_N21
(898 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127; Eukar... 119 9e-26
UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma j... 103 5e-21
UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Or... 100 4e-20
UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellu... 100 4e-20
UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19; Dika... 99 2e-19
UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4; Ascaridida... 96 9e-19
UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5; Archae... 88 3e-16
UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthor... 87 8e-16
UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3; Ascomyc... 85 2e-15
UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1; Dictyos... 83 7e-15
UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12; Eurya... 81 5e-14
UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2; Euryar... 79 1e-13
UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Re... 79 2e-13
UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18; Archa... 77 5e-13
UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus... 77 8e-13
UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1... 76 1e-12
UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=... 75 3e-12
UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2; Cryptos... 73 8e-12
UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=... 72 2e-11
UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoe... 72 2e-11
UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeu... 70 7e-11
UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus... 67 5e-10
UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S riboso... 66 1e-09
UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein, puta... 64 6e-09
UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, wh... 63 8e-09
UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5; ... 62 2e-08
UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containin... 58 4e-07
UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4; Thermo... 57 7e-07
UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4; ... 54 7e-06
UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S riboso... 45 0.002
UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum... 40 0.086
UniRef50_Q4P756 Cluster: Putative uncharacterized protein; n=1; ... 37 0.80
UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1; ... 35 3.2
>UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127;
Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens
(Human)
Length = 145
Score = 119 bits (287), Expect = 9e-26
Identities = 54/83 (65%), Positives = 65/83 (78%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
WFY R A+ RH+Y+R GV ++TKI+GGR RNGV PSHF R S S+AR+ LQ+LE LK
Sbjct: 52 WFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLK 111
Query: 408 LVEKVQDGGRILTTQGRRDLDRI 476
+VEK QDGGR LT QG+RDLDRI
Sbjct: 112 MVEKDQDGGRKLTPQGQRDLDRI 134
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/49 (61%), Positives = 37/49 (75%)
Frame = +2
Query: 74 MRSVTVKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYD 220
M VTVK V Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYD 49
>UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06232 protein - Schistosoma
japonicum (Blood fluke)
Length = 142
Score = 103 bits (248), Expect = 5e-21
Identities = 49/83 (59%), Positives = 61/83 (73%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
WFYVRCAAILRH+YIR P G+ + K F + RNGV PSH + GS+ RKA+Q +EAL
Sbjct: 52 WFYVRCAAILRHLYIR-PTGLTGLCKAFSRKKRNGVKPSHRSLAHGSVIRKAIQQMEALG 110
Query: 408 LVEKVQDGGRILTTQGRRDLDRI 476
L +K + GGR LT+ GRRDLDR+
Sbjct: 111 LCQKREGGGRSLTSAGRRDLDRL 133
Score = 50.8 bits (116), Expect = 5e-05
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +2
Query: 74 MRSVTVKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDP 223
M V+VK V+ VK +A LKKTGKV++P+ D+VK + +LAPY+P
Sbjct: 1 MAPVSVKDVDGHVFVKALAQFLKKTGKVRLPDWTDVVKLSSANQLAPYNP 50
>UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S19 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 100 bits (240), Expect = 4e-20
Identities = 42/83 (50%), Positives = 60/83 (72%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
W+Y R A+I R IY+R +GV KI+GGR RNG P HFC+SSG+I+R LQ L+ +
Sbjct: 75 WYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMG 134
Query: 408 LVEKVQDGGRILTTQGRRDLDRI 476
+++ GGR++T+QGRRDLD++
Sbjct: 135 IIDVDPKGGRLITSQGRRDLDQV 157
Score = 44.8 bits (101), Expect = 0.003
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 20/66 (30%)
Frame = +2
Query: 86 TVKXVEQXKXVKTVAAHLKKTGKV--------------------KVPEHMDLVKTARFKE 205
TVK V + VK +AHLK++GK+ ++PE +D+VKTARFKE
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKLFVASQELLLLGNLRISFYQMELPEWVDIVKTARFKE 67
Query: 206 LAPYDP 223
L PYDP
Sbjct: 68 LPPYDP 73
>UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellular
organisms|Rep: 40S ribosomal protein S19 - Oryza sativa
subsp. japonica (Rice)
Length = 146
Score = 100 bits (240), Expect = 4e-20
Identities = 42/83 (50%), Positives = 60/83 (72%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
W+Y R A+I R IY+R +GV KI+GGR RNG P HFC+SSG+I+R LQ L+ +
Sbjct: 55 WYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMG 114
Query: 408 LVEKVQDGGRILTTQGRRDLDRI 476
+++ GGR++T+QGRRDLD++
Sbjct: 115 IIDVDPKGGRLITSQGRRDLDQV 137
Score = 64.5 bits (150), Expect = 3e-09
Identities = 28/46 (60%), Positives = 37/46 (80%)
Frame = +2
Query: 86 TVKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDP 223
TVK V + VK +AHLK++GK+++PE +D+VKTARFKEL PYDP
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDP 53
>UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19;
Dikarya|Rep: 40S ribosomal protein S19-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 144
Score = 98.7 bits (235), Expect = 2e-19
Identities = 44/83 (53%), Positives = 59/83 (71%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
W+YVR AAI RHIY+R VGV + K++GG G+ PSH SGS+ RK +QSLE +
Sbjct: 52 WYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIG 111
Query: 408 LVEKVQDGGRILTTQGRRDLDRI 476
++EK +GGR ++ QG+RDLDRI
Sbjct: 112 VLEKSDNGGRRISQQGQRDLDRI 134
Score = 56.0 bits (129), Expect = 1e-06
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +2
Query: 74 MRSVTVKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDP 223
M V+VK V+ K + AA LK++GK+ P+ +D+VKT KELAPYDP
Sbjct: 1 MAGVSVKDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDP 50
>UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4;
Ascarididae|Rep: Ribosomal protein S19S - Parascaris
univalens
Length = 128
Score = 96.3 bits (229), Expect = 9e-19
Identities = 43/74 (58%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
W+YVR A++ R +YIRSP GV + +++G R GVTP+HF ++SGS+ RKALQ+LEA+K
Sbjct: 53 WYYVRTASVARRLYIRSPTGVGALRRVYGSNKRRGVTPNHFAKASGSVIRKALQTLEAIK 112
Query: 408 LVEKVQDG-GRILT 446
VEK DG GRILT
Sbjct: 113 WVEKHPDGNGRILT 126
Score = 48.8 bits (111), Expect = 2e-04
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = +2
Query: 98 VEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYD 220
++Q + V+ +A LKK+GKVKVPE DLVK KELAP D
Sbjct: 10 IDQHEIVRQIAGFLKKSGKVKVPEWSDLVKLGITKELAPVD 50
>UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5;
Archaea|Rep: 30S ribosomal protein S19e - Pyrococcus
horikoshii
Length = 150
Score = 87.8 bits (208), Expect = 3e-16
Identities = 40/83 (48%), Positives = 54/83 (65%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
W+Y R A+ILR +YI PVG++ + +GGR G P F ++ GSI RKALQ LEA
Sbjct: 50 WWYYRVASILRRVYIDGPVGIERLRTYYGGRKNRGHAPERFYKAGGSIIRKALQQLEAAG 109
Query: 408 LVEKVQDGGRILTTQGRRDLDRI 476
+EKV GR++T +GR LD+I
Sbjct: 110 FIEKVPGKGRVVTPKGRSFLDKI 132
>UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthora
infestans|Rep: Ribosomal protein S19 - Phytophthora
infestans (Potato late blight fungus)
Length = 154
Score = 86.6 bits (205), Expect = 8e-16
Identities = 42/105 (40%), Positives = 64/105 (60%), Gaps = 4/105 (3%)
Frame = +3
Query: 174 WIL*RQLASKSWLRMTLXWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFC 353
W + + + K + W+Y+R A+I R +Y+R GV ++ K++GG R GV HF
Sbjct: 43 WDVVKTASFKEYSPADPDWYYIRAASIARKVYLRQYTGVGSLKKVYGGAARKGVHRQHFQ 102
Query: 354 RSSGSIARKALQSLEALKLVEK----VQDGGRILTTQGRRDLDRI 476
++SG + R LQ LE +K+VEK V GGR +T+ G++DLDRI
Sbjct: 103 KASGGLIRHILQQLEEMKVVEKCPEGVNKGGRKITSHGQQDLDRI 147
Score = 56.4 bits (130), Expect = 9e-07
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +2
Query: 74 MRSVTVKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDP 223
+R VTV+ V+ + +K A HLK++GK+++P D+VKTA FKE +P DP
Sbjct: 10 VRGVTVRDVKPAEFIKAYAEHLKRSGKIELPAWWDVVKTASFKEYSPADP 59
>UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3;
Ascomycota|Rep: 40S ribosomal protein S19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 221
Score = 85.0 bits (201), Expect = 2e-15
Identities = 40/84 (47%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
W+YVR AA+ RHIY+R VGV + K+ G G P+H +SGS+ RK +QSLE +
Sbjct: 126 WYYVRAAAVARHIYMRKTVGVGRLRKVHGSTKNRGSRPNHHVDASGSVDRKIIQSLEKIG 185
Query: 408 LVEKVQD-GGRILTTQGRRDLDRI 476
++E ++ GGR +T G+RDLDRI
Sbjct: 186 VLEYDEEKGGRRITQAGQRDLDRI 209
Score = 33.9 bits (74), Expect = 5.7
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 89 VKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYD 220
V+ + K + +A LK+ GK+ +P +D VKT+ EL P D
Sbjct: 80 VEILTAQKFIAAYSAFLKRQGKLPIPGWVDTVKTSCSNELPPQD 123
>UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S19 - Dictyostelium discoideum AX4
Length = 148
Score = 83.4 bits (197), Expect = 7e-15
Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
W Y R A + R +YIR GV T ++FGG RNGV P+HF +G R L+ L+ LK
Sbjct: 54 WIYYRIATLARKVYIRGGDGVATYRRVFGGNRRNGVRPNHFADVNGGNIRYCLKQLQNLK 113
Query: 408 LVE-KVQDGGRILTTQGRRDLDRI 476
++E GGR +T GRRDLDRI
Sbjct: 114 VIETDAVKGGRTITATGRRDLDRI 137
Score = 47.2 bits (107), Expect = 6e-04
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +2
Query: 80 SVTVKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDP 223
+VT+K V + + T A LKKTG+V++P+ D+ KTA ++EL P +P
Sbjct: 5 AVTLKDVCPQEFIATYARFLKKTGRVQIPKWNDIAKTATYRELPPTNP 52
>UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Methanobacterium thermoautotrophicum
Length = 145
Score = 80.6 bits (190), Expect = 5e-14
Identities = 37/82 (45%), Positives = 55/82 (67%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
W+YVR AA+LR +YI PVGV ++ +GG+ G P F R SG+I R+ALQ LE
Sbjct: 50 WWYVRAAALLRRVYIDGPVGVNSLRTHYGGKKDRGSRPEKFRRGSGAIIRRALQQLEESG 109
Query: 408 LVEKVQDGGRILTTQGRRDLDR 473
L+++ ++ GR++T +GR LD+
Sbjct: 110 LIKR-EENGRVITPEGRSFLDK 130
Score = 34.3 bits (75), Expect = 4.3
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = +2
Query: 86 TVKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDP 223
TV V + VA LK KVK PE ++ VKT KE P +P
Sbjct: 3 TVYDVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENP 48
>UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Archaeoglobus fulgidus
Length = 147
Score = 79.4 bits (187), Expect = 1e-13
Identities = 36/83 (43%), Positives = 53/83 (63%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
W+Y+R A+I R +YI PVG++ + +GGR R G P F + SG+I R AL LE L
Sbjct: 48 WWYLRLASIFRRVYIDGPVGIERLRTFYGGRKRRGSKPPKFRKGSGAIVRNALHQLEQLG 107
Query: 408 LVEKVQDGGRILTTQGRRDLDRI 476
V+K ++ GR++T GR LD++
Sbjct: 108 FVKKTRE-GRVVTPMGRSFLDKV 129
>UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Rep:
Ribosomal protein S19E - Methanopyrus kandleri
Length = 149
Score = 79.0 bits (186), Expect = 2e-13
Identities = 37/81 (45%), Positives = 52/81 (64%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
W+Y+R A+ILR +Y+ PVGV + +GGR G P F + SG+I RK LQ LE
Sbjct: 50 WWYMRAASILRRVYMDGPVGVSRLRTYYGGRQDRGARPERFRKGSGAIIRKILQQLEEAG 109
Query: 408 LVEKVQDGGRILTTQGRRDLD 470
LVEK ++ GR++T +GR +D
Sbjct: 110 LVEKTEE-GRVVTPEGRSLVD 129
>UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18;
Archaea|Rep: 30S ribosomal protein S19e - Aeropyrum
pernix
Length = 153
Score = 77.4 bits (182), Expect = 5e-13
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIR-SPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEAL 404
W+YVR A+ILR +Y P+G++T I+GGR G P HF ++ GS+ RK LQ LE
Sbjct: 51 WWYVRAASILRKLYKSPEPIGIETFRTIYGGRQNRGSAPEHFRKAGGSVPRKILQQLEEA 110
Query: 405 KLVEKVQDGGRILTTQGRRDLD 470
LV KV GR ++ GR LD
Sbjct: 111 GLVVKVPGRGRTISPAGRSLLD 132
>UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 150
Score = 76.6 bits (180), Expect = 8e-13
Identities = 33/83 (39%), Positives = 53/83 (63%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
W++ RCA+I+R IY+ P+G+ + K +GG +G +H + G+I R A+ LE L
Sbjct: 49 WWHTRCASIMRKIYLHGPIGINELRKDYGGGKPSGYGAAHHKDAGGAIIRNAIHGLEKLG 108
Query: 408 LVEKVQDGGRILTTQGRRDLDRI 476
+EKV+ GRI++ QG + LDR+
Sbjct: 109 YLEKVEKKGRIVSKQGMQKLDRL 131
>UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1;
Griffithsia japonica|Rep: Putative 40S ribosomal protein
S19 - Griffithsia japonica (Red alga)
Length = 150
Score = 76.2 bits (179), Expect = 1e-12
Identities = 34/81 (41%), Positives = 51/81 (62%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
W Y+R A+I R +YIR +G KI+G R R G+ P +SSG + R +LQ LE L
Sbjct: 59 WLYIRIASIARKLYIRGGIGTGEFRKIYGDRKRRGMKPCRSSKSSGGLIRYSLQQLEKLG 118
Query: 408 LVEKVQDGGRILTTQGRRDLD 470
+ EK + GGR +T++G+ ++D
Sbjct: 119 VAEKDERGGRRITSKGQSEMD 139
Score = 54.0 bits (124), Expect = 5e-06
Identities = 23/46 (50%), Positives = 32/46 (69%)
Frame = +2
Query: 86 TVKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDP 223
TVK V + V T A+HLK+ G +++P +D +KTA +ELAPYDP
Sbjct: 12 TVKDVPAAEFVNTYASHLKRVGMIEIPPWVDTIKTAASRELAPYDP 57
>UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=2;
Theileria|Rep: 40S ribosomal protein S19, putative -
Theileria parva
Length = 169
Score = 74.5 bits (175), Expect = 3e-12
Identities = 32/77 (41%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
WFY+R AA+LRH+Y GV + K++ + RNG P+H CR+SG I R +Q LE++
Sbjct: 74 WFYIRAAAVLRHLYFHPDSGVDRLRKVYSSKKRNGSAPNHTCRASGKILRTIVQQLESIG 133
Query: 408 LVEK-VQDGGRILTTQG 455
+E+ ++ GR L+ +G
Sbjct: 134 FLEQDLKKHGRRLSRKG 150
Score = 39.1 bits (87), Expect = 0.15
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 80 SVTVKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDP 223
+ ++K VK A H+K G ++ P+ +D KT+ KELAP DP
Sbjct: 25 NTSLKDCNPDLFVKAFAEHMKLKGYLECPKRLDYAKTSVAKELAPQDP 72
>UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S19 -
Cryptosporidium parvum Iowa II
Length = 154
Score = 73.3 bits (172), Expect = 8e-12
Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
W Y+R A+ILRH+Y+R VGV ++K +G + RNG +H +S I R L L++L
Sbjct: 65 WLYIRAASILRHLYVRPNVGVGALSKFYGRKQRNGTARNHSAVASRGIIRYCLIQLQSLG 124
Query: 408 LVE-KVQDGGRILTTQGRRDLDRI 476
LVE G R L+ QG+R+LD I
Sbjct: 125 LVEFNPNTGTRRLSPQGQRELDSI 148
Score = 37.9 bits (84), Expect = 0.35
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +2
Query: 86 TVKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAP 214
T K V ++ A LKK GK+ +PE +D VKTA KEL P
Sbjct: 18 TAKDVPAGILIEKFAQQLKKGGKMTMPEWVDHVKTASSKELPP 60
>UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S19, putative -
Babesia bovis
Length = 171
Score = 72.1 bits (169), Expect = 2e-11
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
WFY+R AAILRH+Y G+ + +++ R R G P+H C +SG I R +Q LEA
Sbjct: 74 WFYIRSAAILRHLYFHPDEGIGRLRRVYASRKRRGCAPNHTCPASGKIIRTIVQQLEANG 133
Query: 408 LVEKVQDG-GRILTTQG 455
+EK +D GR L+ +G
Sbjct: 134 FLEKSKDNKGRRLSRRG 150
>UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoeba
histolytica|Rep: 40S ribosomal protein S19 - Entamoeba
histolytica
Length = 148
Score = 72.1 bits (169), Expect = 2e-11
Identities = 33/83 (39%), Positives = 50/83 (60%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
W Y+R AAI R +Y+ + +GV + + +G + PSH SG + R LQ LE +
Sbjct: 53 WIYIRAAAIARKVYLNNGIGVMALRRAYGDQYNKHYYPSHRTLGSGKVNRYILQQLEKMG 112
Query: 408 LVEKVQDGGRILTTQGRRDLDRI 476
+V K+Q GR LT +GR+D+D+I
Sbjct: 113 IVGKIQ-SGRSLTKEGRKDMDKI 134
Score = 49.6 bits (113), Expect = 1e-04
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = +2
Query: 89 VKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDP 223
+K V +K A HLKK+GK+++PE +D VKT KELAP +P
Sbjct: 7 IKDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNP 51
>UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S19E - Cenarchaeum
symbiosum
Length = 144
Score = 70.1 bits (164), Expect = 7e-11
Identities = 29/83 (34%), Positives = 51/83 (61%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
W++ RCA+++R IY+ P+G+ + +GG G ++ ++ G+I R A+ LE L
Sbjct: 43 WWHTRCASLMRKIYLHGPIGINGLRSEYGGGKPRGYGAANHRKAGGAIIRNAVHGLEKLG 102
Query: 408 LVEKVQDGGRILTTQGRRDLDRI 476
+EK+ GRI++ QG + LDR+
Sbjct: 103 YIEKLDKKGRIVSRQGMQKLDRL 125
>UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S19e -
Methanoregula boonei (strain 6A8)
Length = 199
Score = 67.3 bits (157), Expect = 5e-10
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
W++ R AA+LR +Y+ P+GV+ + +GG G P+ F + SGS+ RKALQ LEA
Sbjct: 50 WWFTRAAAVLRRVYVDGPLGVERMRSFYGGSKNRGSKPNAFRKGSGSVLRKALQQLEAAG 109
Query: 408 LVEKVQD-GGRILTTQGRRDLDRI 476
L+ V D GR ++ G LD +
Sbjct: 110 LI--VHDKTGRKVSPAGMAFLDSV 131
>UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 268
Score = 66.1 bits (154), Expect = 1e-09
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +3
Query: 324 RNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 476
R+ V PSHF R S S A + LQ+LE LK+VEK QDGGR L QG+RDLDRI
Sbjct: 207 RHRVRPSHFSRGSKSAACRVLQALEGLKMVEKDQDGGRKLIPQGQRDLDRI 257
Score = 51.2 bits (117), Expect = 3e-05
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 104 QXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYD 220
Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPY+
Sbjct: 156 QQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYE 194
>UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein,
putative; n=9; Trypanosomatidae|Rep: 40S ribosomal
protein S19 protein, putative - Leishmania major
Length = 172
Score = 63.7 bits (148), Expect = 6e-09
Identities = 33/83 (39%), Positives = 45/83 (54%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
W+Y+RCAA+LR IY+R VG ++K FG + G P H SS A +SL L
Sbjct: 77 WYYIRCAAVLRAIYLRPGVGYGGLSKRFGNKKNYGSRPEHTVTSSTGPLHWACKSLTKLG 136
Query: 408 LVEKVQDGGRILTTQGRRDLDRI 476
LVE G+ LT +G + D +
Sbjct: 137 LVEPGAQSGQRLTRKGHKFADSL 159
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/52 (36%), Positives = 32/52 (61%)
Frame = +2
Query: 68 GKMRSVTVKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDP 223
GK + T+K V + +KT A H K+ GK+ VP +++K++ +E AP +P
Sbjct: 24 GKRKGATLKDVSAWRWIKTAARHFKQEGKIFVPNCTEIMKSSHGRERAPQNP 75
>UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 63.3 bits (147), Expect = 8e-09
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
W YVR AA+ R IY+R GV +T +FG NG S SG + R LQ LE +K
Sbjct: 104 WMYVRAAALARKIYVRGHWGVGNLTHMFGSVNDNGKHES----GSGKVIRYLLQQLETIK 159
Query: 408 LVEK-----VQDGGRILTTQGRRDLDRI 476
+++K ++ G RI+T +G++DL+RI
Sbjct: 160 VLKKDNKSLLKKGSRIVTKEGQQDLNRI 187
Score = 40.7 bits (91), Expect = 0.049
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +2
Query: 86 TVKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYD 220
TVK V ++ A +LKK K+K+PE +VKT KE +P D
Sbjct: 57 TVKDVPAQDFIRGYAEYLKKNNKIKIPEWASIVKTGLGKETSPID 101
>UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5;
Plasmodium|Rep: Ribosomal protein S19e, putative -
Plasmodium yoelii yoelii
Length = 193
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
W++++ ++ILR +YI +GV + + F + R GV P+H +SG I R LQ LE +
Sbjct: 96 WYFIKTSSILRRLYIHPDIGVGFLRRQFSYKQRRGVAPNHTSLASGKILRSILQQLENIG 155
Query: 408 LVEK-VQDGGRILTTQGRRDLD 470
VE+ + GR LTT+G ++
Sbjct: 156 YVEQNPKKKGRRLTTKGENAIN 177
>UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S19e containing protein - Tetrahymena
thermophila SB210
Length = 155
Score = 57.6 bits (133), Expect = 4e-07
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
W Y+R AA+ R +Y++ G+ T+ IFG G + G I R AL+SLE LK
Sbjct: 56 WVYIRTAALARKVYLKPHTGISTLKHIFGSNKDRGNLRNKHQACHGKILRWALKSLEDLK 115
Query: 408 LVEKVQDG-----GRILTTQGRRDLDRI 476
++ K ++ R++T +G +L+RI
Sbjct: 116 IIRKDKNSATKKFSRVITKEGMTELNRI 143
Score = 38.7 bits (86), Expect = 0.20
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 86 TVKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYD 220
TVK V ++ A+HLKK K+ +PE T+ +ELAP D
Sbjct: 9 TVKDVAAADFIREYASHLKKANKLSIPEFTQWTTTSVARELAPQD 53
>UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S19e -
Thermoplasma volcanium
Length = 150
Score = 56.8 bits (131), Expect = 7e-07
Identities = 31/81 (38%), Positives = 43/81 (53%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
W YVR A++LR +YI +G+ ++ +GG+ G H S SI R LE+
Sbjct: 50 WIYVRAASMLRKLYINGYLGISRMSSEYGGKVDRGSKRYHAASGSRSITRFLFHELESAG 109
Query: 408 LVEKVQDGGRILTTQGRRDLD 470
LV+K Q GR L+ QG LD
Sbjct: 110 LVQKTQK-GRSLSPQGMSLLD 129
>UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19e,
putative - Trichomonas vaginalis G3
Length = 148
Score = 53.6 bits (123), Expect = 7e-06
Identities = 28/83 (33%), Positives = 44/83 (53%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
W+Y+R AA+ R IY+ + + +G + P H +S + R LQ LE
Sbjct: 59 WWYIRAAAVTRQIYLHHDASLSGLAFHYGANMKAVTMPKHHHEASRKVIRTILQQLEKAG 118
Query: 408 LVEKVQDGGRILTTQGRRDLDRI 476
LV +V + GR LT +G++ LD+I
Sbjct: 119 LV-RVAEKGRQLTPKGQKLLDQI 140
Score = 34.7 bits (76), Expect = 3.2
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 116 VKTVAAHLKKTGKVKVPEHMDLVKTARFKELAP 214
V +A H + T ++ PE DLVKTA K+LAP
Sbjct: 22 VNALAKHYQDTQVIRNPEWADLVKTASLKQLAP 54
>UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 131
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +3
Query: 315 GRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
GR RNGV PSHF R S ++AR+ LQ+LE LK
Sbjct: 77 GRQRNGVRPSHFNRGSKTVARRVLQALEGLK 107
>UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S19e -
Halorubrum lacusprofundi ATCC 49239
Length = 163
Score = 39.9 bits (89), Expect = 0.086
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +3
Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFG----GRXRNGVTPSHFCRSSGSIARKALQSL 395
++YVR A++LR + P+G++ + +G G R V P S + R +LQ+L
Sbjct: 60 FWYVRSASLLRKVAQNEPIGIERLATEYGSKKRGSNRYSVRPGEHEGGSRKLIRASLQAL 119
Query: 396 EALKLVEKVQDGGRILTTQGRRDLDRI 476
E LV GR ++ G L +
Sbjct: 120 EEDGLVTTAAGEGRRISDDGEAFLSEV 146
>UniRef50_Q4P756 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 350
Score = 36.7 bits (81), Expect = 0.80
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = +2
Query: 50 FRLSTQGKMRSVTVKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPXL 229
++L+ Q R + + VE + A H K K+ + V FK+ PY P
Sbjct: 87 YQLNVQDAERDLLIPAVEGTLNLLRFAKHEKSVKKIVITSSFAAV--TNFKDGGPYRPGF 144
Query: 230 VLCALCCHPSSY 265
V A C +PSSY
Sbjct: 145 VYTADCWNPSSY 156
>UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1;
Xanthomonas oryzae pv. oryzae|Rep: Putative
uncharacterized protein - Xanthomonas oryzae pv. oryzae
Length = 390
Score = 34.7 bits (76), Expect = 3.2
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 304 RSLVGA-NVMELHLHISAGHQAVLHARLCNRWRH 402
R+L GA +E H +AG + +HAR+ RWRH
Sbjct: 190 RALAGAAGAVEQHRRQAAGQRIFMHARIAQRWRH 223
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,564,225
Number of Sequences: 1657284
Number of extensions: 9242729
Number of successful extensions: 20320
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 19724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20304
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81161904978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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