Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_N21
         (898 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X73153-1|CAA51677.1|  156|Drosophila melanogaster ribosomal prot...   126   5e-29
AY118868-1|AAM50728.1|  156|Drosophila melanogaster GM26647p pro...   126   5e-29
AF216206-1|AAF65682.1|  156|Drosophila melanogaster ribosomal pr...   126   5e-29
AE014298-2436|AAN09413.1|  156|Drosophila melanogaster CG4464-PC...   126   5e-29
AE014298-2435|AAN09412.1|  156|Drosophila melanogaster CG4464-PB...   126   5e-29
AE014298-2434|AAF48633.1|  156|Drosophila melanogaster CG4464-PA...   126   5e-29
AY119257-1|AAM51117.1|  155|Drosophila melanogaster SD22440p pro...   116   3e-26
AE014297-3411|AAN13960.1|  155|Drosophila melanogaster CG5338-PB...   116   3e-26

>X73153-1|CAA51677.1|  156|Drosophila melanogaster ribosomal protein
           S19 protein.
          Length = 156

 Score =  126 bits (303), Expect = 5e-29
 Identities = 57/83 (68%), Positives = 69/83 (83%)
 Frame = +3

Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
           WFYVRCA+ILRH+Y RSP GV ++TKI+GGR RNGV PSHFCR++   ARKALQ+LE  +
Sbjct: 52  WFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHAR 111

Query: 408 LVEKVQDGGRILTTQGRRDLDRI 476
           LVEK  DGGR L++ G+RDLDRI
Sbjct: 112 LVEKHPDGGRKLSSIGQRDLDRI 134



 Score = 72.9 bits (171), Expect = 5e-13
 Identities = 32/50 (64%), Positives = 39/50 (78%)
 Frame = +2

Query: 74  MRSVTVKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDP 223
           M  VTVK ++Q    K VA  LKKTGK+KVP+ MD++KTA+FKELAPYDP
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIIKTAKFKELAPYDP 50


>AY118868-1|AAM50728.1|  156|Drosophila melanogaster GM26647p
           protein.
          Length = 156

 Score =  126 bits (303), Expect = 5e-29
 Identities = 57/83 (68%), Positives = 69/83 (83%)
 Frame = +3

Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
           WFYVRCA+ILRH+Y RSP GV ++TKI+GGR RNGV PSHFCR++   ARKALQ+LE  +
Sbjct: 52  WFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHAR 111

Query: 408 LVEKVQDGGRILTTQGRRDLDRI 476
           LVEK  DGGR L++ G+RDLDRI
Sbjct: 112 LVEKHPDGGRKLSSIGQRDLDRI 134



 Score = 73.3 bits (172), Expect = 4e-13
 Identities = 33/50 (66%), Positives = 39/50 (78%)
 Frame = +2

Query: 74  MRSVTVKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDP 223
           M  VTVK ++Q    K VA  LKKTGK+KVP+ MD+VKTA+FKELAPYDP
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDP 50


>AF216206-1|AAF65682.1|  156|Drosophila melanogaster ribosomal
           protein S19 protein.
          Length = 156

 Score =  126 bits (303), Expect = 5e-29
 Identities = 57/83 (68%), Positives = 69/83 (83%)
 Frame = +3

Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
           WFYVRCA+ILRH+Y RSP GV ++TKI+GGR RNGV PSHFCR++   ARKALQ+LE  +
Sbjct: 52  WFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHAR 111

Query: 408 LVEKVQDGGRILTTQGRRDLDRI 476
           LVEK  DGGR L++ G+RDLDRI
Sbjct: 112 LVEKHPDGGRKLSSIGQRDLDRI 134



 Score = 73.3 bits (172), Expect = 4e-13
 Identities = 33/50 (66%), Positives = 39/50 (78%)
 Frame = +2

Query: 74  MRSVTVKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDP 223
           M  VTVK ++Q    K VA  LKKTGK+KVP+ MD+VKTA+FKELAPYDP
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDP 50


>AE014298-2436|AAN09413.1|  156|Drosophila melanogaster CG4464-PC,
           isoform C protein.
          Length = 156

 Score =  126 bits (303), Expect = 5e-29
 Identities = 57/83 (68%), Positives = 69/83 (83%)
 Frame = +3

Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
           WFYVRCA+ILRH+Y RSP GV ++TKI+GGR RNGV PSHFCR++   ARKALQ+LE  +
Sbjct: 52  WFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHAR 111

Query: 408 LVEKVQDGGRILTTQGRRDLDRI 476
           LVEK  DGGR L++ G+RDLDRI
Sbjct: 112 LVEKHPDGGRKLSSIGQRDLDRI 134



 Score = 73.3 bits (172), Expect = 4e-13
 Identities = 33/50 (66%), Positives = 39/50 (78%)
 Frame = +2

Query: 74  MRSVTVKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDP 223
           M  VTVK ++Q    K VA  LKKTGK+KVP+ MD+VKTA+FKELAPYDP
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDP 50


>AE014298-2435|AAN09412.1|  156|Drosophila melanogaster CG4464-PB,
           isoform B protein.
          Length = 156

 Score =  126 bits (303), Expect = 5e-29
 Identities = 57/83 (68%), Positives = 69/83 (83%)
 Frame = +3

Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
           WFYVRCA+ILRH+Y RSP GV ++TKI+GGR RNGV PSHFCR++   ARKALQ+LE  +
Sbjct: 52  WFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHAR 111

Query: 408 LVEKVQDGGRILTTQGRRDLDRI 476
           LVEK  DGGR L++ G+RDLDRI
Sbjct: 112 LVEKHPDGGRKLSSIGQRDLDRI 134



 Score = 73.3 bits (172), Expect = 4e-13
 Identities = 33/50 (66%), Positives = 39/50 (78%)
 Frame = +2

Query: 74  MRSVTVKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDP 223
           M  VTVK ++Q    K VA  LKKTGK+KVP+ MD+VKTA+FKELAPYDP
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDP 50


>AE014298-2434|AAF48633.1|  156|Drosophila melanogaster CG4464-PA,
           isoform A protein.
          Length = 156

 Score =  126 bits (303), Expect = 5e-29
 Identities = 57/83 (68%), Positives = 69/83 (83%)
 Frame = +3

Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
           WFYVRCA+ILRH+Y RSP GV ++TKI+GGR RNGV PSHFCR++   ARKALQ+LE  +
Sbjct: 52  WFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHAR 111

Query: 408 LVEKVQDGGRILTTQGRRDLDRI 476
           LVEK  DGGR L++ G+RDLDRI
Sbjct: 112 LVEKHPDGGRKLSSIGQRDLDRI 134



 Score = 73.3 bits (172), Expect = 4e-13
 Identities = 33/50 (66%), Positives = 39/50 (78%)
 Frame = +2

Query: 74  MRSVTVKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDP 223
           M  VTVK ++Q    K VA  LKKTGK+KVP+ MD+VKTA+FKELAPYDP
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDP 50


>AY119257-1|AAM51117.1|  155|Drosophila melanogaster SD22440p
           protein.
          Length = 155

 Score =  116 bits (280), Expect = 3e-26
 Identities = 52/83 (62%), Positives = 63/83 (75%)
 Frame = +3

Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
           WFY RCA+I+RH+Y+RSP GV   TK++ GR RNGV PS  CRSS    RKALQ+LEA  
Sbjct: 52  WFYTRCASIMRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAAN 111

Query: 408 LVEKVQDGGRILTTQGRRDLDRI 476
           +VE+  DGGR LT QG+R+LDRI
Sbjct: 112 MVERHPDGGRKLTPQGQRNLDRI 134



 Score = 52.0 bits (119), Expect = 1e-06
 Identities = 25/49 (51%), Positives = 32/49 (65%)
 Frame = +2

Query: 74  MRSVTVKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYD 220
           M  VTVK ++Q    K +AA LKK+GK+ VPE    +KT +FKE AP D
Sbjct: 1   MPGVTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTD 49


>AE014297-3411|AAN13960.1|  155|Drosophila melanogaster CG5338-PB
           protein.
          Length = 155

 Score =  116 bits (280), Expect = 3e-26
 Identities = 52/83 (62%), Positives = 63/83 (75%)
 Frame = +3

Query: 228 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALK 407
           WFY RCA+I+RH+Y+RSP GV   TK++ GR RNGV PS  CRSS    RKALQ+LEA  
Sbjct: 52  WFYTRCASIMRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAAN 111

Query: 408 LVEKVQDGGRILTTQGRRDLDRI 476
           +VE+  DGGR LT QG+R+LDRI
Sbjct: 112 MVERHPDGGRKLTPQGQRNLDRI 134



 Score = 52.0 bits (119), Expect = 1e-06
 Identities = 25/49 (51%), Positives = 32/49 (65%)
 Frame = +2

Query: 74  MRSVTVKXVEQXKXVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYD 220
           M  VTVK ++Q    K +AA LKK+GK+ VPE    +KT +FKE AP D
Sbjct: 1   MPGVTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTD 49


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,975,647
Number of Sequences: 53049
Number of extensions: 461525
Number of successful extensions: 950
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)