Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_N19
         (1127 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    24   2.4  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   9.8  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 14/40 (35%), Positives = 17/40 (42%)
 Frame = +3

Query: 708 PPAPXSXLSPXSXPXPPXSXXXPPXPPSTSXXTKPXSXLS 827
           PPAP S  +P S          P  PP+T+    P S  S
Sbjct: 12  PPAPQSAATPISSSGMTSPAAAP--PPATTSSGSPASVAS 49


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 13/44 (29%), Positives = 16/44 (36%)
 Frame = +3

Query: 663 PRXRSXXPRVPXTXXPPAPXSXLSPXSXPXPPXSXXXPPXPPST 794
           P+  S  P  P    PP      +P S P P  S       P+T
Sbjct: 273 PKSASLSPP-PHVYNPPDHIQQATPYSAPGPTYSTWSTVQTPTT 315


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,327
Number of Sequences: 336
Number of extensions: 1557
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 32681749
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)