Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_N19
(1127 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 36 0.014
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.018
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 34 0.032
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.22
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.68
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 1.2
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 29 1.6
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 28 2.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 8.4
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 8.4
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.5 bits (78), Expect = 0.014
Identities = 29/131 (22%), Positives = 38/131 (29%), Gaps = 6/131 (4%)
Frame = +1
Query: 523 PPXXXPXXRPXXXLXIXXXPRPRXSXXXXXXXXPSTTPXPRXLCXPPXAXARXXPGFPXL 702
PP P P + P P+ S P P P + A P +
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGI 1091
Query: 703 XXLRXPXXXSPPYX------PPXPXXPXAXPXPPPXLXXXXNPPXXSPXPXSXPRXSLIT 864
+ P +PP PP P A P P P + P P P+ S+
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP--VPKPSVAA 1149
Query: 865 APXSXPQXQQP 897
P P P
Sbjct: 1150 PPVPAPSGAPP 1160
Score = 31.1 bits (67), Expect = 0.29
Identities = 32/127 (25%), Positives = 38/127 (29%), Gaps = 2/127 (1%)
Frame = +1
Query: 496 PPXXXKPCVPPXXXPXXR-PXXXLXIXXXPRPRXSXXXXXXXXPS-TTPXPRXLCXPPXA 669
PP PP P P + P P+ S PS P P+ P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171
Query: 670 XARXXPGFPXLXXLRXPXXXSPPYXPPXPXXPXAXPXPPPXLXXXXNPPXXSPXPXSXPR 849
A G P + P PP PP A P P P + PP + P P
Sbjct: 1172 PA-PSSGIPPVPK---PAAGVPPVPPP----SEAPPVPKPSVGVPPVPPPSTAPPVPTPS 1223
Query: 850 XSLITAP 870
L P
Sbjct: 1224 AGLPPVP 1230
Score = 30.3 bits (65), Expect = 0.51
Identities = 24/92 (26%), Positives = 31/92 (33%), Gaps = 2/92 (2%)
Frame = +3
Query: 633 PXPPXTLXASPRXRSXXPRVPX--TXXPPAPXSXLSPXSXPXPPXSXXXPPXPPSTSXXT 806
P P P S P VP PP P +P P P S PP PP ++
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP---PVPKPSVGVPPVPPPSTAPP 1218
Query: 807 KPXSXLSXXXLXXPXLSXHSXPLXASXPTTPS 902
P + P + + P+ A PS
Sbjct: 1219 VPTPSAGLPPVPVP--TAKAPPVPAPSSEAPS 1248
Score = 29.1 bits (62), Expect = 1.2
Identities = 29/121 (23%), Positives = 38/121 (31%)
Frame = +3
Query: 684 PRVPXTXXPPAPXSXLSPXSXPXPPXSXXXPPXPPSTSXXTKPXSXLSXXXLXXPXLSXH 863
P P + PP P S + PP P P S T P + L+ P LS
Sbjct: 963 PAAPPSIPPPLPVSNILSSPTSEPP-KDHPPSAPLSKPVSTSPAAPLARVP-PVPKLSSK 1020
Query: 864 SXPLXASXPTTPSXXLLXAXXXTXCXRXXXPLPXXTPXXSIXWXRPPLXKXXPPXNTXPP 1043
+ P+ P P+P P I PP+ K + PP
Sbjct: 1021 APPVPLPSADAP----------------PIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPP 1064
Query: 1044 P 1046
P
Sbjct: 1065 P 1065
Score = 28.7 bits (61), Expect = 1.6
Identities = 23/98 (23%), Positives = 30/98 (30%), Gaps = 6/98 (6%)
Frame = +1
Query: 622 PSTTPXPRXLCXPPXAXARXXPGFPXLXXLRXPXXXSPPYXPPXPXXPXAXPXP----PP 789
P + P + + P A P P L P PP P A P P P
Sbjct: 991 PPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTP 1050
Query: 790 XLXXXXNPPXXSPXPXSXPRXSL--ITAPXSXPQXQQP 897
+ + +P P P + I AP P P
Sbjct: 1051 PVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAP 1088
Score = 28.3 bits (60), Expect = 2.1
Identities = 21/90 (23%), Positives = 28/90 (31%), Gaps = 1/90 (1%)
Frame = +3
Query: 633 PXPPXTLXASPRXR-SXXPRVPXTXXPPAPXSXLSPXSXPXPPXSXXXPPXPPSTSXXTK 809
P P ++ A P S P VP P S P P + PP PP +
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPV 1200
Query: 810 PXSXLSXXXLXXPXLSXHSXPLXASXPTTP 899
P + + P + A P P
Sbjct: 1201 PKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.1 bits (77), Expect = 0.018
Identities = 23/83 (27%), Positives = 26/83 (31%), Gaps = 1/83 (1%)
Frame = +1
Query: 625 STTPXPRXLCXPPXAXARXXPGFPXLXXLRXPXXXS-PPYXPPXPXXPXAXPXPPPXLXX 801
ST P P PP A P P + P PP P P P P PP
Sbjct: 413 STPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPA 472
Query: 802 XXNPPXXSPXPXSXPRXSLITAP 870
PP + P S+ P
Sbjct: 473 APAPPPAPAPAPAAPVASIAELP 495
Score = 29.1 bits (62), Expect = 1.2
Identities = 26/109 (23%), Positives = 31/109 (28%), Gaps = 1/109 (0%)
Frame = +1
Query: 658 PPXAXARXXPGFPXLXXLRXPXXXSPPYXPPXPXXPXAXPXPPPXLXXXXNPPXXS-PXP 834
PP +R G P + PP PP + P PP PP S P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPST 372
Query: 835 XSXPRXSLITAPXSXPQXQQPXQXNFSXPXXXLLAXAXTCHSPRXXLXP 981
P + S P P S P L A +P P
Sbjct: 373 GRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPP 421
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 708 PPAPXSXLSPXSXPXPPXSXXXPPXPPSTS 797
PP P + S P PP PP PP S
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRS 368
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +1
Query: 733 PPYXPPXPXXPXAXPXPPPXLXXXXNPPXXSPXP 834
PP P P P PPP +PP P P
Sbjct: 241 PPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP 274
Score = 26.2 bits (55), Expect = 8.4
Identities = 23/97 (23%), Positives = 28/97 (28%)
Frame = +3
Query: 756 PXSXXXPPXPPSTSXXTKPXSXLSXXXLXXPXLSXHSXPLXASXPTTPSXXLLXAXXXTX 935
P S PP PPS P S P + S +S P +P +
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPA 283
Query: 936 CXRXXXPLPXXTPXXSIXWXRPPLXKXXPPXNTXPPP 1046
P P P + K PP PPP
Sbjct: 284 INSTSKP-PLPPPSSRVSAAALAANKKRPP--PPPPP 317
Score = 26.2 bits (55), Expect = 8.4
Identities = 27/121 (22%), Positives = 42/121 (34%)
Frame = +3
Query: 684 PRVPXTXXPPAPXSXLSPXSXPXPPXSXXXPPXPPSTSXXTKPXSXLSXXXLXXPXLSXH 863
P +P + P S +P P PP S PP++ +P + +S P ++
Sbjct: 234 PSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNS--PPRPIAPVS----MNPAINST 287
Query: 864 SXPLXASXPTTPSXXLLXAXXXTXCXRXXXPLPXXTPXXSIXWXRPPLXKXXPPXNTXPP 1043
S P P P + A + P P P +PP+ + PP
Sbjct: 288 SKP-----PLPPPSSRVSAAALAANKKRPPPPP---PPSRRNRGKPPIGNGSSNSSLPPP 339
Query: 1044 P 1046
P
Sbjct: 340 P 340
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 34.3 bits (75), Expect = 0.032
Identities = 25/65 (38%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = -1
Query: 848 RGXEXGXGEXXGGFXXXXSX-GGGWGXAXGXXGXGGXXGGEXXXGXRRXXSXGNPGXXRA 672
RG G GGF GGG G A G G GG GG G R G+ G R
Sbjct: 8 RGGRGGSRGGRGGFNGGRGGFGGGRGGARGG-GRGGARGGRGGRGGARGGRGGSSG-GRG 65
Query: 671 XAXGG 657
A GG
Sbjct: 66 GAKGG 70
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.5 bits (68), Expect = 0.22
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 639 PPXTLXASPRXRSXXPRVPXTXXPPA-PXSXL-SPXSXPXPPXSXXXPPXPP 788
PP + ++P S P +P + PPA P + + SP S P P + PP PP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSA--VPPMPP 199
Score = 27.9 bits (59), Expect = 2.7
Identities = 24/100 (24%), Positives = 29/100 (29%)
Frame = +1
Query: 688 GFPXLXXLRXPXXXSPPYXPPXPXXPXAXPXPPPXLXXXXNPPXXSPXPXSXPRXSLITA 867
G P L + + P P P P + PP + P SP
Sbjct: 108 GMPKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPI 167
Query: 868 PXSXPQXQQPXQXNFSXPXXXLLAXAXTCHSPRXXLXPRS 987
P S P QP S P L A P+ P S
Sbjct: 168 PSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLS 207
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.9 bits (64), Expect = 0.68
Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Frame = +3
Query: 675 SXXPRVPXTXXPP---APXSXLSPXSXPXPPXSXXXPPXPPSTSXXTKPXS 818
S P P + PP AP P S P PP + P PPS P S
Sbjct: 1688 STPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPAS 1738
Score = 26.6 bits (56), Expect = 6.3
Identities = 15/52 (28%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Frame = +1
Query: 685 PGFPXLXXLRXPXXXSPPYX--PPXPXXPXAXPXPPPXLXXXXNPPXXSPXP 834
P P P +PP P P P + P PP PP P P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.6 bits (56), Expect = 6.3
Identities = 13/40 (32%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = +1
Query: 730 SPPYXPPXPXXPX-AXPXPPPXLXXXXNPPXXSPXPXSXP 846
+PP P P + P PPP PP P P P
Sbjct: 1689 TPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.1 bits (62), Expect = 1.2
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +1
Query: 685 PGFPXLXXLRXPXXXSPPYXPPXPXXPXAXPXPPPXLXXXXNPPXXSPXP 834
P P + P P PP P P PPP PP P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.1 bits (57), Expect = 4.8
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 3/38 (7%)
Frame = +1
Query: 730 SPPYXPPXPXXPXAXPXP---PPXLXXXXNPPXXSPXP 834
SPP PP P P P PP PP P P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/50 (28%), Positives = 17/50 (34%), Gaps = 3/50 (6%)
Frame = +1
Query: 718 PXXXSPPYXPPXPXXPXAXPXP---PPXLXXXXNPPXXSPXPXSXPRXSL 858
P PP PP P A P P PP +P P + P +
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEPKI 805
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 28.7 bits (61), Expect = 1.6
Identities = 16/55 (29%), Positives = 19/55 (34%)
Frame = +1
Query: 625 STTPXPRXLCXPPXAXARXXPGFPXLXXLRXPXXXSPPYXPPXPXXPXAXPXPPP 789
++ P P PP PG P + L PP PP P P P P
Sbjct: 489 TSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMS---QPPMVPPGMALPPGMPAPFP 540
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.3 bits (60), Expect = 2.1
Identities = 19/67 (28%), Positives = 20/67 (29%)
Frame = -1
Query: 833 GXGEXXGGFXXXXSXGGGWGXAXGXXGXGGXXGGEXXXGXRRXXSXGNPGXXRAXAXGGX 654
G G GG GG+G G G G GG G G PG G
Sbjct: 189 GFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFG 248
Query: 653 QSXRGXG 633
G G
Sbjct: 249 GGLGGFG 255
Score = 27.1 bits (57), Expect = 4.8
Identities = 18/65 (27%), Positives = 18/65 (27%)
Frame = -1
Query: 827 GEXXGGFXXXXSXGGGWGXAXGXXGXGGXXGGEXXXGXRRXXSXGNPGXXRAXAXGGXQS 648
G GGF GG G G G GGE G PG G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Query: 647 XRGXG 633
G G
Sbjct: 244 PGGFG 248
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 8.4
Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 6/67 (8%)
Frame = +3
Query: 615 VXPLYHPXPPXTLXASPRXR--SXXPRVPXTXXPPAPXSXL----SPXSXPXPPXSXXXP 776
+ P Y P L A P + P+ T P P + S + P PP + P
Sbjct: 223 IPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQP 282
Query: 777 PXPPSTS 797
P PP+ +
Sbjct: 283 PRPPTNA 289
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.2 bits (55), Expect = 8.4
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +1
Query: 718 PXXXSPPYXPPXPXXPXAXPXPPP 789
P PP PP P + P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,716,025
Number of Sequences: 5004
Number of extensions: 17876
Number of successful extensions: 159
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 110
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 599646782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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