Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_N14
(920 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14; Eukaryota|... 100 6e-20
UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33; Eukary... 93 9e-18
UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24; Eukary... 88 3e-16
UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core eu... 82 2e-14
UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep: LO... 78 3e-13
UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S riboso... 77 5e-13
UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9; T... 71 3e-11
UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep: Pr... 63 8e-09
UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1; ... 56 1e-06
UniRef50_Q6CF08 Cluster: Yarrowia lipolytica chromosome B of str... 52 3e-05
UniRef50_Q6BYT4 Cluster: Debaryomyces hansenii chromosome A of s... 48 3e-04
UniRef50_A2ETM7 Cluster: Ribosomal protein L38e, putative; n=1; ... 46 0.001
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 46 0.001
UniRef50_A2DFD5 Cluster: 60S ribosomal protein L38-2, putative; ... 46 0.001
UniRef50_Q4UGN5 Cluster: 60S ribosomal protein L38, putative; n=... 45 0.003
UniRef50_Q6CSS8 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 44 0.007
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 43 0.010
UniRef50_P49167 Cluster: 60S ribosomal protein L38; n=8; Fungi/M... 42 0.022
UniRef50_A5K4W1 Cluster: 60S ribosomal protein L38-1, putative; ... 41 0.039
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 40 0.089
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 36 1.1
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 36 1.9
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 36 1.9
UniRef50_A2E8L9 Cluster: 60S ribosomal protein L38-1, putative; ... 35 3.4
UniRef50_Q9YFR9 Cluster: 50S ribosomal protein L38E; n=1; Aeropy... 34 4.4
>UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14;
Eukaryota|Rep: Ribosomal protein L38 - Spodoptera
frugiperda (Fall armyworm)
Length = 70
Score = 100 bits (239), Expect = 6e-20
Identities = 50/65 (76%), Positives = 52/65 (80%)
Frame = +1
Query: 112 MPRXIKXXKXFLIKAXXXXAKSVKIKXXPEXVKFKVRCSRFLYTLVITDKEKAEXLKQSL 291
MPR IK K FL+KA AKSVKIK + VKFKVRCSRFLYTLVITDKEKAE LKQSL
Sbjct: 1 MPREIKDIKDFLLKARRKDAKSVKIKKNQQNVKFKVRCSRFLYTLVITDKEKAEKLKQSL 60
Query: 292 PPGLQ 306
PPGLQ
Sbjct: 61 PPGLQ 65
>UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33;
Eukaryota|Rep: 60S ribosomal protein L38 - Homo sapiens
(Human)
Length = 70
Score = 93.1 bits (221), Expect = 9e-18
Identities = 46/64 (71%), Positives = 50/64 (78%)
Frame = +1
Query: 112 MPRXIKXXKXFLIKAXXXXAKSVKIKXXPEXVKFKVRCSRFLYTLVITDKEKAEXLKQSL 291
MPR I+ K FL+ A AKSVKIK + VKFKVRCSR+LYTLVITDKEKAE LKQSL
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSL 60
Query: 292 PPGL 303
PPGL
Sbjct: 61 PPGL 64
>UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24;
Eukaryota|Rep: 60S ribosomal protein L38 -
Caenorhabditis elegans
Length = 70
Score = 87.8 bits (208), Expect = 3e-16
Identities = 41/65 (63%), Positives = 48/65 (73%)
Frame = +1
Query: 112 MPRXIKXXKXFLIKAXXXXAKSVKIKXXPEXVKFKVRCSRFLYTLVITDKEKAEXLKQSL 291
MP+ IK K FL+KA AKSVKIK KFKVRC+ +LYTLV+ DK+KAE LKQSL
Sbjct: 1 MPKEIKEIKDFLVKARRKDAKSVKIKKNSNNTKFKVRCASYLYTLVVADKDKAEKLKQSL 60
Query: 292 PPGLQ 306
PPG+Q
Sbjct: 61 PPGIQ 65
>UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core
eudicotyledons|Rep: 60S ribosomal protein L38 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 69
Score = 81.8 bits (193), Expect = 2e-14
Identities = 39/64 (60%), Positives = 47/64 (73%)
Frame = +1
Query: 112 MPRXIKXXKXFLIKAXXXXAKSVKIKXXPEXVKFKVRCSRFLYTLVITDKEKAEXLKQSL 291
MP+ I K FL+ A A+SVKIK + VKFKVRCSR+LYTL + D+EKA+ LKQSL
Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSL 60
Query: 292 PPGL 303
PPGL
Sbjct: 61 PPGL 64
>UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep:
LOC548667 protein - Xenopus tropicalis (Western clawed
frog) (Silurana tropicalis)
Length = 419
Score = 78.2 bits (184), Expect = 3e-13
Identities = 37/45 (82%), Positives = 40/45 (88%)
Frame = +1
Query: 169 AKSVKIKXXPEXVKFKVRCSRFLYTLVITDKEKAEXLKQSLPPGL 303
AKSVKIK + VKFKVRCS++LYTLVITDKEKAE LKQSLPPGL
Sbjct: 369 AKSVKIKKNKDNVKFKVRCSKYLYTLVITDKEKAEKLKQSLPPGL 413
>UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S ribosomal
protein L38; n=1; Danio rerio|Rep: PREDICTED: similar to
60S ribosomal protein L38 - Danio rerio
Length = 154
Score = 77.4 bits (182), Expect = 5e-13
Identities = 39/58 (67%), Positives = 43/58 (74%)
Frame = +1
Query: 112 MPRXIKXXKXFLIKAXXXXAKSVKIKXXPEXVKFKVRCSRFLYTLVITDKEKAEXLKQ 285
+PR I+ K FL+ A AKSVKIK + VKFKVRCSR LYTLVITDKEKAE LKQ
Sbjct: 17 LPREIEEIKDFLLTAKRKDAKSVKIKKNKDNVKFKVRCSRHLYTLVITDKEKAEKLKQ 74
>UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9;
Trypanosomatidae|Rep: Ribosomal protein L38, putative -
Leishmania major
Length = 83
Score = 71.3 bits (167), Expect = 3e-11
Identities = 32/65 (49%), Positives = 44/65 (67%)
Frame = +1
Query: 112 MPRXIKXXKXFLIKAXXXXAKSVKIKXXPEXVKFKVRCSRFLYTLVITDKEKAEXLKQSL 291
MPR IK K FL A+ VK+K P KFKVRCSR+LYTLV+ DK+KA+ +++S+
Sbjct: 1 MPREIKTLKEFLAICSRKDARCVKVKHNPSATKFKVRCSRYLYTLVVNDKKKADKIERSI 60
Query: 292 PPGLQ 306
P ++
Sbjct: 61 HPSVK 65
>UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep:
Predicted protein - Ajellomyces capsulatus NAm1
Length = 79
Score = 63.3 bits (147), Expect = 8e-09
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +1
Query: 112 MPRXIKXXKXFLIKAXXXXAKSVKIKXXPEX--VKFKVRCSRFLYTLVITDKEKAEXLKQ 285
MP + K F+ A S +IK + +KFKVRC RFLYTLV+ D +KA+ LKQ
Sbjct: 1 MPSEVSDIKQFIEICRRKDASSARIKRNRKTSQIKFKVRCQRFLYTLVLKDSDKADKLKQ 60
Query: 286 SLPPGLQ 306
SLPP L+
Sbjct: 61 SLPPSLK 67
>UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L38 - Entamoeba histolytica HM-1:IMSS
Length = 77
Score = 56.0 bits (129), Expect = 1e-06
Identities = 24/61 (39%), Positives = 38/61 (62%)
Frame = +1
Query: 112 MPRXIKXXKXFLIKAXXXXAKSVKIKXXPEXVKFKVRCSRFLYTLVITDKEKAEXLKQSL 291
MP+ ++ K L ++V++K E KFKVRC+++LYT + DK KAE LK+++
Sbjct: 1 MPKQVQEFKQILKLLKSGSIRAVRVKTNGENTKFKVRCAKYLYTYICADKAKAEELKKAI 60
Query: 292 P 294
P
Sbjct: 61 P 61
>UniRef50_Q6CF08 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 84
Score = 51.6 bits (118), Expect = 3e-05
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = +1
Query: 136 KXFLIKAXXXXAKSVKIKXXPEXVKFKVRCSRFLYTLVITDKEKAEXLKQSLPPGLQ 306
K FL +SV +K KFK+RC R LYTL + D+ KA+ + QSLP ++
Sbjct: 22 KDFLATCSRDDVESVTVKYSANDTKFKIRCPRMLYTLTVDDRTKADKIVQSLPSSIK 78
>UniRef50_Q6BYT4 Cluster: Debaryomyces hansenii chromosome A of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 78
Score = 48.0 bits (109), Expect = 3e-04
Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Frame = +1
Query: 112 MPRXIKXXKXFLIKAXXXXAKSVKIKXXP---------EXVKFKVRCSRFLYTLVITDKE 264
M R IK K F+ A KS +K + KFKVR SR+ YTLV+ D
Sbjct: 1 MAREIKDIKEFVELARRSDIKSAVVKVNKALNANGKKIKQTKFKVRGSRYQYTLVVNDAA 60
Query: 265 KAEXLKQSLPPGLQ 306
KA+ L+QSLPP L+
Sbjct: 61 KAKKLQQSLPPTLE 74
>UniRef50_A2ETM7 Cluster: Ribosomal protein L38e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L38e,
putative - Trichomonas vaginalis G3
Length = 98
Score = 46.4 bits (105), Expect = 0.001
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +1
Query: 76 FXSAGXKLFVFNMPRXIKXXKXFLIKAXXXXAKSVKIKXXP-EXVKFKVRCSRFLYTLVI 252
F G F +MP+ + K FL A AK VK+K E KFK+R +++LYTL +
Sbjct: 14 FRKVGWPFFT-SMPKQVTTPKEFLALAARSDAKWVKVKKSSDENTKFKLRTTKYLYTLTV 72
Query: 253 TDKEKAEXLKQSLPPGLQ 306
K E ++ S+P L+
Sbjct: 73 KPK-FVELVQNSIPESLE 89
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/54 (50%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 637 CINXSATARGEAVXVLGALPXPRSLTXXARSFGCGXRY-XXTPXX*YGXPXXXG 795
CI ATAR EAV VL ALP RS T RS GCG +P YG P G
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_A2DFD5 Cluster: 60S ribosomal protein L38-2, putative;
n=4; Trichomonas vaginalis G3|Rep: 60S ribosomal protein
L38-2, putative - Trichomonas vaginalis G3
Length = 74
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +1
Query: 112 MPRXIKXXKXFLIKAXXXXAKSVKIKXXPEXV-KFKVRCSRFLYTLVITDKEKAEXLKQS 288
MP+ + K FL A AK VK+K + + KFK+R ++FLYTLV+ K E ++ S
Sbjct: 1 MPKQVATPKEFLALAARPDAKWVKVKKVNDDLTKFKLRTTKFLYTLVVKPK-FVELVQNS 59
Query: 289 LPPGLQ 306
+P L+
Sbjct: 60 IPESLE 65
>UniRef50_Q4UGN5 Cluster: 60S ribosomal protein L38, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L38, putative -
Theileria annulata
Length = 79
Score = 44.8 bits (101), Expect = 0.003
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Frame = +1
Query: 112 MPRXIKXXKXFLIKAXXXXAKSV-----KIKXXPEXVKFKVRCSRFLYTLVITDKEKAEX 276
MP+ +K K +L AKSV K K KFKVRCSR+LYT + ++ KA
Sbjct: 1 MPKELKDLKDYLNVLKRPDAKSVVVYKKKSKGGLLSTKFKVRCSRYLYTFSVPNQVKAAK 60
Query: 277 LKQSLPPGLQ 306
++ ++P L+
Sbjct: 61 VEATIPSNLE 70
>UniRef50_Q6CSS8 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome C of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Saccharomycetales|Rep: Kluyveromyces lactis
strain NRRL Y-1140 chromosome C of strain NRRL Y- 1140
of Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 78
Score = 43.6 bits (98), Expect = 0.007
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +1
Query: 208 KFKVRCSRFLYTLVITDKEKAEXLKQSLPP 297
KFK+R SR+LYTL++ D KA+ L QSLPP
Sbjct: 42 KFKLRGSRYLYTLIVNDAGKAKKLLQSLPP 71
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 43.2 bits (97), Expect = 0.010
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = +2
Query: 635 SALMXXPPXGERRFXYWALFRFLXH 709
+ALM P GERRF YWALFRFL H
Sbjct: 25 AALMNRPTRGERRFAYWALFRFLAH 49
>UniRef50_P49167 Cluster: 60S ribosomal protein L38; n=8;
Fungi/Metazoa group|Rep: 60S ribosomal protein L38 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 78
Score = 41.9 bits (94), Expect = 0.022
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +1
Query: 208 KFKVRCSRFLYTLVITDKEKAEXLKQSLPPGLQ 306
KFKVR S LYTLVI D KA+ L QSLPP L+
Sbjct: 42 KFKVRGSSSLYTLVINDAGKAKKLIQSLPPTLK 74
>UniRef50_A5K4W1 Cluster: 60S ribosomal protein L38-1, putative;
n=4; Plasmodium|Rep: 60S ribosomal protein L38-1,
putative - Plasmodium vivax
Length = 93
Score = 41.1 bits (92), Expect = 0.039
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +1
Query: 172 KSVKIKXXPEXVKFKVRCSRFLYTLVITDKEKAEXLKQSLPPGLQ 306
K K K K K+R ++LYT+V DK+KAE ++ SL P L+
Sbjct: 28 KKSKTKKNTIITKLKLRTKKYLYTMVFADKKKAERIENSLLPSLK 72
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 39.9 bits (89), Expect = 0.089
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = +1
Query: 685 GALPXPRSLTXXARSFGCGXRYXXT 759
G +P PRSLT ARSFGCG RY T
Sbjct: 34 GDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 36.3 bits (80), Expect = 1.1
Identities = 20/34 (58%), Positives = 20/34 (58%)
Frame = +3
Query: 708 TDSLXSVVRXRXXVSXHSXGVIRXSPXSGGXXXK 809
TDSL SVVR R VS HS VIR S SG K
Sbjct: 24 TDSLRSVVRLRRAVSAHSKAVIRLSTESGDNAGK 57
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 35.5 bits (78), Expect = 1.9
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 452 IRYIDEFGQTTTRMQ 496
IRYIDEFGQTTTRMQ
Sbjct: 350 IRYIDEFGQTTTRMQ 364
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 35.5 bits (78), Expect = 1.9
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -1
Query: 689 APNTQTASPRAVAXSLMQ 636
APNTQTASPRA+A SLMQ
Sbjct: 331 APNTQTASPRALADSLMQ 348
>UniRef50_A2E8L9 Cluster: 60S ribosomal protein L38-1, putative;
n=1; Trichomonas vaginalis G3|Rep: 60S ribosomal protein
L38-1, putative - Trichomonas vaginalis G3
Length = 93
Score = 34.7 bits (76), Expect = 3.4
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 112 MPRXIKXXKXFLIKAXXXXAKSVKI-KXXPEXVKFKVRCSRFLYTLVITDKEKAEXLKQS 288
MP+ + + F+ + AK+V I + E KFK++ ++ LYTL + E + + S
Sbjct: 1 MPKQVLTARQFVERCMAPDAKNVVILRVNDETAKFKLKTTKQLYTLTVKKGELIQQVIDS 60
Query: 289 LP 294
LP
Sbjct: 61 LP 62
>UniRef50_Q9YFR9 Cluster: 50S ribosomal protein L38E; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L38E - Aeropyrum
pernix
Length = 67
Score = 34.3 bits (75), Expect = 4.4
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 169 AKSVKIKXXPEXVKFKVRCSRFLYTLVITDKEKAEXLKQ 285
A ++K + VK K R R+LYTL + +++AE L+Q
Sbjct: 18 AVECRVKRGKDVVKIKARTKRYLYTLKVPPEKEAEVLEQ 56
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,103,196
Number of Sequences: 1657284
Number of extensions: 5722581
Number of successful extensions: 8183
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 7984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8180
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84441173866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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