Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_N08
         (855 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996...    31   1.5  
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329...    29   4.7  
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504...    28   8.3  

>10_06_0039 -
           9966744-9967535,9968241-9968482,9969021-9969223,
           9969333-9970645
          Length = 849

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +1

Query: 430 NPPGXXXPPXGPPXXFXKKKTXXPPPP 510
           NPP    PP  PP  F       PPPP
Sbjct: 326 NPPPAPPPPPPPPSRFNNTTPKPPPPP 352


>02_01_0458 +
           3291563-3291733,3292082-3292769,3292847-3293363,
           3293438-3293637,3294137-3294372,3294469-3295302
          Length = 881

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = +1

Query: 421 KXXNPPGXXXPPXGPPXXFXKKKTXXPPPPXKK 519
           K   PP    PP  PP      +   PPPP KK
Sbjct: 350 KLMPPPPPPPPPPPPPPPPPPPRPPPPPPPIKK 382


>07_01_0674 +
           5047503-5047646,5047808-5047901,5048743-5048828,
           5049380-5049429,5049517-5049586,5049668-5049749,
           5049867-5050267,5050414-5050941,5051823-5052044
          Length = 558

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +1

Query: 433 PPGXXXPPXGPPXXFXKKKTXXPPPP 510
           PP    PP  PP      +T  PPPP
Sbjct: 251 PPPPPPPPGPPPREIVPGQTLLPPPP 276


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,391,286
Number of Sequences: 37544
Number of extensions: 238327
Number of successful extensions: 1126
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)