Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_N08
(855 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical p... 30 1.8
Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical p... 30 1.8
Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical p... 30 1.8
AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kin... 30 1.8
AL117202-27|CAB57897.1| 579|Caenorhabditis elegans Hypothetical... 29 5.6
AF031843-1|AAC13679.1| 579|Caenorhabditis elegans GLY9 protein. 29 5.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 7.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 7.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 7.4
U37430-5|AAB52674.2| 389|Caenorhabditis elegans Set (trithorax/... 28 9.7
>Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 30.3 bits (65), Expect = 1.8
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 70 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFR 243
+P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122
Query: 244 NNSLTRSPSQRTHRTSA 294
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 30.3 bits (65), Expect = 1.8
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 70 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFR 243
+P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122
Query: 244 NNSLTRSPSQRTHRTSA 294
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 30.3 bits (65), Expect = 1.8
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 70 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFR 243
+P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122
Query: 244 NNSLTRSPSQRTHRTSA 294
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 30.3 bits (65), Expect = 1.8
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 70 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFR 243
+P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122
Query: 244 NNSLTRSPSQRTHRTSA 294
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 30.3 bits (65), Expect = 1.8
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 70 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFR 243
+P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122
Query: 244 NNSLTRSPSQRTHRTSA 294
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 30.3 bits (65), Expect = 1.8
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 70 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFR 243
+P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122
Query: 244 NNSLTRSPSQRTHRTSA 294
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kinase
2 protein.
Length = 796
Score = 30.3 bits (65), Expect = 1.8
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 70 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFR 243
+P S A S S+ HH S SL + G + A+ S L+QGHR P G
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALG-----S 122
Query: 244 NNSLTRSPSQRTHRTSA 294
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>AL117202-27|CAB57897.1| 579|Caenorhabditis elegans Hypothetical
protein Y47D3A.23a protein.
Length = 579
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 110 YIMAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTKEFHKTLETTV*LAHQVKGRTGL 289
+++AA V F CI +A RR F DIE + +E + ET HQ+ T
Sbjct: 13 FVIAAFLTVAFFCI-VAYHRNDRRRTKFQFPDIEKYAEELVRLPETWNGELHQIPNYTAP 71
Query: 290 QQG 298
++G
Sbjct: 72 REG 74
>AF031843-1|AAC13679.1| 579|Caenorhabditis elegans GLY9 protein.
Length = 579
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 110 YIMAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTKEFHKTLETTV*LAHQVKGRTGL 289
+++AA V F CI +A RR F DIE + +E + ET HQ+ T
Sbjct: 13 FVIAAFLTVAFFCI-VAYHRNDRRRTKFQFPDIEKYAEELVRLPETWNGELHQIPNYTAP 71
Query: 290 QQG 298
++G
Sbjct: 72 REG 74
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 433 PPGXXXPPXGPPXXFXKKKTXXPPPP 510
PPG PP PP K PPPP
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 433 PPGXXXPPXGPPXXFXKKKTXXPPPP 510
PPG PP PP K PPPP
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 433 PPGXXXPPXGPPXXFXKKKTXXPPPP 510
PPG PP PP K PPPP
Sbjct: 347 PPGGCPPPPPPPPPGGFKGGPPPPPP 372
>U37430-5|AAB52674.2| 389|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 12
protein.
Length = 389
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 85 RCEPDCNTEECXQHLKLKEXPR 20
+C DC TEEC +E PR
Sbjct: 58 KCGTDCTTEECSNFANHRECPR 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,217,223
Number of Sequences: 27780
Number of extensions: 166129
Number of successful extensions: 659
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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