Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_N07
         (899 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    29   0.050
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   1.9  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   7.5  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   9.9  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   9.9  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 29.1 bits (62), Expect = 0.050
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 740 SLKTCILLC*GP*PWPNPSRLRLGLRSS 657
           SL TC +LC  P  WP P  ++L  R S
Sbjct: 64  SLATCNMLCSEPAIWPKPVHIKLTNRES 91


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 740 SLKTCILLC*GP*PWPNPS 684
           SL TC +LC     WP P+
Sbjct: 78  SLSTCSMLCGSTQLWPQPT 96


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 513 CPLGSSK*EYRIFSDKVNSLPSLFLTTSKFF 421
           C L  S    ++F  K+    S+F+TT+ F+
Sbjct: 220 CNLTFSWYSKKVFYSKIIISGSIFMTTTSFY 250


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 394 PCRTWTSPPGPRRRS 350
           P R W+SPP  R  S
Sbjct: 121 PRREWSSPPDARAAS 135


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 394 PCRTWTSPPGPRRRS 350
           P R W+SPP  R  S
Sbjct: 277 PRREWSSPPDARAAS 291


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,587
Number of Sequences: 336
Number of extensions: 4182
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)