Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_N07
         (899 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0261 - 2007522-2007590,2007684-2007926,2008008-2008106,200...    30   2.2  
06_01_1199 - 10313329-10314858                                         29   5.0  
08_01_0606 - 5321751-5321819,5321950-5322192,5322279-5322377,532...    29   6.7  

>03_01_0261 -
           2007522-2007590,2007684-2007926,2008008-2008106,
           2008214-2008693,2008806-2008904,2009097-2009218,
           2009296-2009414,2009492-2009559,2009832-2010017,
           2010323-2010425,2010477-2010556,2010638-2010694,
           2010771-2010913,2010988-2011132,2011501-2011662,
           2011759-2011944,2012273-2012365,2012893-2013053,
           2013440-2013547,2013664-2013928
          Length = 995

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 9/40 (22%)
 Frame = +3

Query: 765 VLEPGSGIIHQIILENYASLXL---------LMIGTDSHT 857
           V+ PGSGI+HQ+ LE  A +            ++GTDSHT
Sbjct: 261 VVPPGSGIVHQVNLEYLARVVFNNGGILYPDSVVGTDSHT 300


>06_01_1199 - 10313329-10314858
          Length = 509

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 307 PPLSCXPWPCKTLIQCAMVAGLQYI 233
           PP    PWP +  I   + AGL+Y+
Sbjct: 316 PPSPALPWPARLRIAVGIAAGLEYL 340


>08_01_0606 -
           5321751-5321819,5321950-5322192,5322279-5322377,
           5322463-5322942,5323069-5323167,5323306-5323427,
           5323517-5323635,5323734-5323801,5323889-5324074,
           5324169-5324244,5324339-5324418,5324505-5324561,
           5324980-5325122,5325208-5325352,5325652-5325813,
           5325893-5326078,5326263-5326355,5326437-5326597,
           5327005-5327109,5328263-5328278
          Length = 902

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 9/40 (22%)
 Frame = +3

Query: 765 VLEPGSGIIHQIILENYASLXL---------LMIGTDSHT 857
           V+ PGSGI+HQ+ LE    +            ++GTDSHT
Sbjct: 177 VVPPGSGIVHQVNLEYLGRVVFNTDGIMYPDSVVGTDSHT 216


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,112,087
Number of Sequences: 37544
Number of extensions: 513153
Number of successful extensions: 1212
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)