Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_N05
         (898 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    32   0.007
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   2.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   7.5  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   9.9  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 31.9 bits (69), Expect = 0.007
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = +2

Query: 449 LRP--PXRASQKSTLKSEVAKPDRTIKIPGVSPWKLPRCALLFPTLPLTGYLSAFLPSGS 622
           LRP  P  A QK     +V      + +PGV+ W  PR    FPT      + A + SG+
Sbjct: 38  LRPLIPATAPQKPDKWEDVMADIERVIMPGVTHWHSPRFHAYFPTANSYPAIVADILSGA 97

Query: 623 VA 628
           +A
Sbjct: 98  IA 99



 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 778 YRHWQQPLVNR 810
           YRHWQ PL  R
Sbjct: 344 YRHWQIPLGRR 354


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 419 FYGSWPFAGLLLTCSFLRYXPDSVDNR 339
           FYGSW      L+   L Y P  V N+
Sbjct: 337 FYGSWINEESKLSLDLLSYVPREVYNK 363


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 825 PXXXNPVNQWLLPVAISRVLPGWTQD 748
           P      + W++P+AI  V  GW ++
Sbjct: 245 PIIEQRADLWIIPIAIFLVSLGWWEN 270


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 825 PXXXNPVNQWLLPVAISRVLPGWTQD 748
           P      + W++P+AI  V  GW ++
Sbjct: 245 PIIEQRADLWIIPIAIFLVSLGWWEN 270


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 825 PXXXNPVNQWLLPVAISRVLPGWTQD 748
           P      + W++P+AI  V  GW ++
Sbjct: 245 PIIEQRADLWIIPIAIFLVSLGWWEN 270


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 825 PXXXNPVNQWLLPVAISRVLPGWTQD 748
           P      + W++P+AI  V  GW ++
Sbjct: 245 PIIEQRADLWIIPIAIFLVSLGWWEN 270


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 667 VGRSLQAGLCARTPRFSPTAAPYPV 741
           V  ++Q   C RT   +  A+PYP+
Sbjct: 246 VTATVQLSTCTRTTLKNNRASPYPM 270


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 12  ITASLYGNSLKI*NAVKKML 71
           + A LYGNS+ + ++V+  L
Sbjct: 214 LNAPLYGNSMSVDSSVQSWL 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,168
Number of Sequences: 336
Number of extensions: 3930
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24927353
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)