Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_N05
         (898 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC142728-1|AAI42729.1|  417|Homo sapiens SAMD14 protein protein.       33   1.4  
BC141822-1|AAI41823.1|  417|Homo sapiens SAMD14 protein protein.       33   1.4  
BC047081-1|AAH47081.1|  427|Homo sapiens SAMD14 protein protein.       33   1.4  
BC029872-1|AAH29872.1|  247|Homo sapiens SAMD14 protein protein.       33   1.4  
BC113467-1|AAI13468.1| 1121|Homo sapiens WD repeat domain 6 prot...    30   9.9  
BC101707-1|AAI01708.1| 1121|Homo sapiens WD repeat domain 6 prot...    30   9.9  
AF099100-1|AAF80244.1| 1121|Homo sapiens WD-repeat protein 6 pro...    30   9.9  

>BC142728-1|AAI42729.1|  417|Homo sapiens SAMD14 protein protein.
          Length = 417

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +2

Query: 455 PPXRASQKSTLKSEVAKPDRTIKIPGVSPWKLPRCALLFPTL 580
           P   ASQ+STL  +   P  + KIP   PW+  +C+  + TL
Sbjct: 268 PKKSASQESTLSDDSTPPSSSPKIPS-GPWQEAKCSYPYHTL 308


>BC141822-1|AAI41823.1|  417|Homo sapiens SAMD14 protein protein.
          Length = 417

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +2

Query: 455 PPXRASQKSTLKSEVAKPDRTIKIPGVSPWKLPRCALLFPTL 580
           P   ASQ+STL  +   P  + KIP   PW+  +C+  + TL
Sbjct: 268 PKKSASQESTLSDDSTPPSSSPKIPS-GPWQEAKCSYPYHTL 308


>BC047081-1|AAH47081.1|  427|Homo sapiens SAMD14 protein protein.
          Length = 427

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +2

Query: 455 PPXRASQKSTLKSEVAKPDRTIKIPGVSPWKLPRCALLFPTL 580
           P   ASQ+STL  +   P  + KIP   PW+  +C+  + TL
Sbjct: 278 PKKSASQESTLSDDSTPPSSSPKIPS-GPWQEAKCSYPYHTL 318


>BC029872-1|AAH29872.1|  247|Homo sapiens SAMD14 protein protein.
          Length = 247

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +2

Query: 455 PPXRASQKSTLKSEVAKPDRTIKIPGVSPWKLPRCALLFPTL 580
           P   ASQ+STL  +   P  + KIP   PW+  +C+  + TL
Sbjct: 98  PKKSASQESTLSDDSTPPSSSPKIPS-GPWQEAKCSYPYHTL 138


>BC113467-1|AAI13468.1| 1121|Homo sapiens WD repeat domain 6
           protein.
          Length = 1121

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 20/67 (29%), Positives = 31/67 (46%)
 Frame = +3

Query: 543 GSSLXALSCFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPXQPD 722
           G  L  + C   C L   C    + +AW+ L   A  +S +   + P+ A+  N P  PD
Sbjct: 146 GCILQEVPCTDRCTLSSAC---LIGDAWKELTIVAGAVSNQLLVWYPATALADNKPVAPD 202

Query: 723 RCALSGN 743
           R  +SG+
Sbjct: 203 R-RISGH 208


>BC101707-1|AAI01708.1| 1121|Homo sapiens WD repeat domain 6 protein
           protein.
          Length = 1121

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 20/67 (29%), Positives = 31/67 (46%)
 Frame = +3

Query: 543 GSSLXALSCFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPXQPD 722
           G  L  + C   C L   C    + +AW+ L   A  +S +   + P+ A+  N P  PD
Sbjct: 146 GCILQEVPCTDRCTLSSAC---LIGDAWKELTIVAGAVSNQLLVWYPATALADNKPVAPD 202

Query: 723 RCALSGN 743
           R  +SG+
Sbjct: 203 R-RISGH 208


>AF099100-1|AAF80244.1| 1121|Homo sapiens WD-repeat protein 6
           protein.
          Length = 1121

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 20/67 (29%), Positives = 31/67 (46%)
 Frame = +3

Query: 543 GSSLXALSCFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPXQPD 722
           G  L  + C   C L   C    + +AW+ L   A  +S +   + P+ A+  N P  PD
Sbjct: 146 GCILQEVPCTDRCTLSSAC---LIGDAWKELTIVAGAVSNQLLVWYPATALADNKPVAPD 202

Query: 723 RCALSGN 743
           R  +SG+
Sbjct: 203 R-RISGH 208


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,974,825
Number of Sequences: 237096
Number of extensions: 2587401
Number of successful extensions: 11231
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11231
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)