Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_N04
         (884 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    27   0.15 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    25   0.79 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   4.2  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   9.7  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 27.5 bits (58), Expect = 0.15
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +2

Query: 710 FCEXRFMDPDELYRHLRRST 769
           FC  RF   DEL RHLR  T
Sbjct: 351 FCGKRFTRSDELQRHLRTHT 370


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 454 DIKNAYENLLENRCKICDKIPPFRNFXF 537
           DI +   N L N C++ + I  F+NF F
Sbjct: 212 DIVHGVHNELCNLCQVANSIYGFQNFLF 239


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 762 GALVLSFV*CRWTEFYY 812
           GA V +F    WT FYY
Sbjct: 933 GAFVAAFQIDNWTSFYY 949


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 762 GALVLSFV*CRWTEFYY 812
           GA V +F    WT FYY
Sbjct: 933 GAFVAAFQIDNWTSFYY 949


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 762 GALVLSFV*CRWTEFYY 812
           GA V +F    WT FYY
Sbjct: 933 GAFVAAFQIDNWTSFYY 949


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 762 GALVLSFV*CRWTEFYY 812
           GA V +F    WT FYY
Sbjct: 933 GAFVAAFQIDNWTSFYY 949


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 769 SAPAQVTVQLVRIHEPXLTEXTKWMA 692
           S+P Q  V L  +HEP L    K  A
Sbjct: 231 SSPVQSDVSLSPVHEPLLITTEKLAA 256


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 239 YYSIGECDHPV 271
           YY  GEC++P+
Sbjct: 298 YYCGGECEYPI 308


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,356
Number of Sequences: 336
Number of extensions: 4537
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)