Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_N04
(884 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical pr... 123 2e-28
U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical p... 42 8e-04
U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical pr... 35 0.067
U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical pr... 35 0.067
U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical pr... 33 0.21
AC006835-1|AAF40015.2| 903|Caenorhabditis elegans Hypothetical ... 33 0.27
U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical pr... 31 0.83
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF000194-1|AAK39376.4| 386|Caenorhabditis elegans Hypothetical ... 31 1.4
Z70780-6|CAA94823.1| 614|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical pr... 30 1.9
X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger pro... 30 1.9
AL117202-18|CAB57896.3| 765|Caenorhabditis elegans Hypothetical... 30 1.9
AF025464-4|AAB71017.3| 310|Caenorhabditis elegans Mnat (menage ... 30 1.9
U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical pr... 29 3.3
U23520-3|AAC46555.2| 470|Caenorhabditis elegans Hypothetical pr... 29 3.3
U23520-2|AAR25655.1| 485|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical ... 29 3.3
AF043700-8|AAB97574.2| 374|Caenorhabditis elegans Hypothetical ... 29 3.3
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 29 3.3
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 29 3.3
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 29 3.3
U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical p... 29 4.4
AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical ... 29 4.4
AF016677-3|AAL11110.2| 216|Caenorhabditis elegans Hypothetical ... 29 4.4
AC024826-3|AAP13746.1| 343|Caenorhabditis elegans Hypothetical ... 29 4.4
AC024826-2|AAF60798.1| 413|Caenorhabditis elegans Hypothetical ... 29 4.4
Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical pr... 29 5.8
U80442-6|AAB37669.1| 294|Caenorhabditis elegans Hypothetical pr... 29 5.8
U20864-11|AAV58867.1| 583|Caenorhabditis elegans C. elegans ADA... 29 5.8
U20864-10|AAK68355.1| 596|Caenorhabditis elegans C. elegans ADA... 29 5.8
AC024849-1|AAK68546.2| 374|Caenorhabditis elegans Hypothetical ... 29 5.8
Z81585-6|CAB04684.2| 482|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z75540-6|CAN86598.1| 584|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z75540-3|CAD01084.1| 581|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z75540-2|CAA99848.1| 582|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 28 7.7
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 28 7.7
AF040651-1|AAB95013.4| 691|Caenorhabditis elegans Nhl (ring fin... 28 7.7
AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical ... 28 7.7
>U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical
protein C52E12.1 protein.
Length = 925
Score = 123 bits (296), Expect = 2e-28
Identities = 64/188 (34%), Positives = 93/188 (49%), Gaps = 4/188 (2%)
Frame = +2
Query: 212 CVVCFKNVLYYSIGECDHPVCFECSTRMRVLCLQNECPICRKDL--LRVVFTDSIHPYKE 385
C +C K + IG C HPVC EC RMR+L CP+CR D+ L TD
Sbjct: 89 CDICCKKNDVFGIGSCRHPVCAECVIRMRILGNSKTCPVCRSDIDILSFCTTDDDLANVP 148
Query: 386 LGNRXIPXIDCLKDNTKLYSVLKT*KM--HMKTCWRIGVKSVIRYHRSATLXLLNDHMRR 559
L + D + + + + + K ++ +I + L HM
Sbjct: 149 LSFKKTAHPDEDRYDIRFSNKIAGTKYEKYLAHVCKICKTDDGERLEFPSFMSLRQHMAS 208
Query: 560 VHERFFCDLCVNHLKIFTNERRCYTRQELAHHRRKGDLDDTSHRGHPLCXFCEXRFMDPD 739
HE+ +C +C ++L +F+ ER+ YTR +L H R GD DD S +GHP C FCE +F+D +
Sbjct: 209 RHEQSYCHICTDNLNLFSRERKTYTRDQLQRHMRSGDFDDKSFKGHPQCLFCEQKFLDEE 268
Query: 740 ELYRHLRR 763
YRHLR+
Sbjct: 269 NRYRHLRK 276
>U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical
protein C32D5.11 protein.
Length = 770
Score = 41.5 bits (93), Expect = 8e-04
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 113 SQFNKTLGYRNAFTES*INNTTIMSEAQANENTCVVCFKNVLYYS--IGECDHPVCFECS 286
+ F KT+G ++ E I + + S E C +C I C+H CF C
Sbjct: 37 NSFIKTMG--DSGVEPVIPSPSTSSNNPVEELQCTICLSTRFSQECRIEGCNHSFCFSCI 94
Query: 287 TRMRVLCLQNECPICRKDLLRVVF 358
+ L+ CP+CRKD+ +V +
Sbjct: 95 SEWVCQSLRPSCPMCRKDVDKVSY 118
>U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical
protein F10D7.5c protein.
Length = 437
Score = 35.1 bits (77), Expect = 0.067
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 194 QANE-NTCVVCFKNVLYYSIGECDHP-VCFECSTRMRVLCLQNECPICRKDLLRVVFT 361
+ NE + C +C + + C H +CFEC R+ L + CPICR + V+ T
Sbjct: 379 EVNEGDECTICMDAPVNSVLYTCGHMCMCFECGRRL--LTTKGTCPICRAPVQDVIKT 434
>U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical
protein F10D7.5a protein.
Length = 617
Score = 35.1 bits (77), Expect = 0.067
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 194 QANE-NTCVVCFKNVLYYSIGECDHP-VCFECSTRMRVLCLQNECPICRKDLLRVVFT 361
+ NE + C +C + + C H +CFEC R+ L + CPICR + V+ T
Sbjct: 559 EVNEGDECTICMDAPVNSVLYTCGHMCMCFECGRRL--LTTKGTCPICRAPVQDVIKT 614
>U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical
protein C26B9.6 protein.
Length = 306
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 194 QANENTCVVCF-KNVLYYSIGECDHPVCFECSTRMRVLCLQNECPICRKDLLRVVFT 361
Q + + C +C+ K + I C H C+ C + N+CP+CR + +F+
Sbjct: 101 QQDHDICYICYYKLTIPTRIENCGHEFCYVCLKSN--FAMGNDCPVCRGKISPSLFS 155
>AC006835-1|AAF40015.2| 903|Caenorhabditis elegans Hypothetical
protein ZK993.2 protein.
Length = 903
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +2
Query: 218 VCFKNVLYYSIGECDHPVCFECSTRMRVLCLQ--NECPICRKDLLRVVFTDSIHPYKELG 391
+C S E P+ +CS + +LC+ ++CPIC ++ L D +
Sbjct: 471 ICINKENLISDTEDHQPILIDCSHSICLLCVTVTSDCPICSREFLEPHVNDDFLELVKYA 530
Query: 392 NRXIPXID 415
N +P D
Sbjct: 531 NSILPKDD 538
>U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical
protein F56D1.1 protein.
Length = 468
Score = 31.9 bits (69), Expect = 0.63
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 602 KIFTNERRCYTRQELAHHRRKGDLDDTSHRGHPLCXFCEXRFMDPDELYRHLR 760
K+ E ++E+A +RK T HP C FCE +F P++L H++
Sbjct: 50 KVCIEEVEEVEKEEIASRKRKRG--KTKDEFHP-CPFCEKKFRYPNKLREHIK 99
>Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical
protein F54B11.5 protein.
Length = 201
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +2
Query: 179 IMSEAQANENTCVVCFKNVLYYSIGECDHPVCFECSTRMRVLCLQNECPICR 334
I+++ E CV+C +N+ + C H C C CPIC+
Sbjct: 118 ILTQTSDVEGNCVICMENINDLLL-PCLHAFCIRCIANEMEYRHDFSCPICK 168
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +2
Query: 143 NAFTES*INNTTIMSEAQANENTCVVCFKNVLYYSIGECDHPVCFECSTRMRVLCLQNEC 322
N T+S + ++ E E C VC ++L EC H C C L ++ C
Sbjct: 318 NLLTDSSVGTKSVDHE----EQPCAVCHGDLLQPIKLECTHVFCKFCIETW--LDQKSTC 371
Query: 323 PICRKDLLR 349
PICR ++ +
Sbjct: 372 PICRAEVTK 380
>AF000194-1|AAK39376.4| 386|Caenorhabditis elegans Hypothetical
protein ZC328.2 protein.
Length = 386
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +2
Query: 677 DTSHRGHPLCXFCEXRFMDPDELYRHLRRST 769
D S G C CE F PD L RH RR T
Sbjct: 240 DGSAPGQYYCFICEKDFRRPDILSRHTRRHT 270
>Z70780-6|CAA94823.1| 614|Caenorhabditis elegans Hypothetical
protein F46B6.7 protein.
Length = 614
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 436 IVFCSEDIKNAYENLLENRCKICDKIPPFRN 528
+VF +E I++ E L N C C+KI P RN
Sbjct: 339 LVFVTEYIEHLKEKLHRNECIYCEKIFPDRN 369
>Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical
protein F52E10.1 protein.
Length = 1201
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +2
Query: 653 HRRKGDLDDTSHRGHPLCXFCEXRFMDPDELYRHLRRSTCTVICVMPMDRIL 808
HR + +D + G C C F++ D L++H R VI P+D+ L
Sbjct: 254 HRGRFRIDGRIY-GDYFCHICGTVFIEQDNLFKHWRLHCEEVIAYTPVDQYL 304
>X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger
protein protein.
Length = 1203
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +2
Query: 653 HRRKGDLDDTSHRGHPLCXFCEXRFMDPDELYRHLRRSTCTVICVMPMDRIL 808
HR + +D + G C C F++ D L++H R VI P+D+ L
Sbjct: 256 HRGRFRIDGRIY-GDYFCHICGTVFIEQDNLFKHWRLHCEEVIAYTPVDQYL 306
>AL117202-18|CAB57896.3| 765|Caenorhabditis elegans Hypothetical
protein Y47D3A.22 protein.
Length = 765
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 203 ENTCVVCFKNVLYYSIGECDHPVCFECSTRMRVLCLQNECPICRKDL 343
E C +C ++ + C H C +C+ + L+ +C ICRK +
Sbjct: 717 ETNCAICM-DLKIAVVFNCGHTACVDCADK-----LKKQCHICRKTI 757
>AF025464-4|AAB71017.3| 310|Caenorhabditis elegans Mnat (menage a
trois) tfiih subunitprotein 1 protein.
Length = 310
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 236 LYYSIGECDHPVCFECSTRMRVLCLQNECPICRKDLLRVVFTDSIH 373
L I EC HP+C C + L N C +C + L + F + I+
Sbjct: 17 LVMMINECGHPLCKNCVDNIFALNSGN-CHVCNRVLRKNNFREQIY 61
>U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical
protein F42C5.4 protein.
Length = 712
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 248 IGECDHPVCFECSTRMRVLCLQNECPICRKDLLR 349
+ C+H +C +C + ECPIC++ L+R
Sbjct: 51 VSSCNHSLCSQCFDKF------TECPICKEPLVR 78
>U23520-3|AAC46555.2| 470|Caenorhabditis elegans Hypothetical
protein C35B8.3a protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 388 WEQGNTLXRLFERQYKIVFCSEDIKNAYENL 480
WEQ T L + Y++ CS+D++N L
Sbjct: 415 WEQAFTPEALIQCVYRLTHCSDDVRNLVSGL 445
>U23520-2|AAR25655.1| 485|Caenorhabditis elegans Hypothetical
protein C35B8.3b protein.
Length = 485
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 388 WEQGNTLXRLFERQYKIVFCSEDIKNAYENL 480
WEQ T L + Y++ CS+D++N L
Sbjct: 430 WEQAFTPEALIQCVYRLTHCSDDVRNLVSGL 460
>AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical
protein Y38F1A.2 protein.
Length = 283
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Frame = +2
Query: 143 NAFTES*INNTTIMSEAQANENTCVVCFKNVLYYSIGECDHPVCFECS----TRMRVLCL 310
NA I I + + C +C N + + +C H C EC + + +
Sbjct: 82 NAERNQIITQRRISEALHQSSHECPICLANASFPVLTDCGHIFCCECIIQYWQQSKAIVT 141
Query: 311 QNECPICR 334
+C +CR
Sbjct: 142 PCDCAMCR 149
>AF043700-8|AAB97574.2| 374|Caenorhabditis elegans Hypothetical
protein K09H9.1 protein.
Length = 374
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 790 HHTNDSTSAPAQVTVQLVRIHEPXLTEXTKWMAPV 686
HHTNDS + P T+Q + E L++ K ++ V
Sbjct: 39 HHTNDSITLPYDATIQKIAEKEKNLSKLLKELSIV 73
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +2
Query: 140 RNAFTES*INNTTIMSEAQANENTCVVCFKNVLYYSIG---ECDHPVCFECSTRMRVLCL 310
R F++ I +I S + ++ C +C + + +C EC+T+ L
Sbjct: 1003 RKLFSQPNIVTASITS-TELDDTECAICLDEMTNFKETIKCQCRRRFHLECATKW--LNE 1059
Query: 311 QNECPICRKDLL 346
+ ECP CRK LL
Sbjct: 1060 KRECPTCRKLLL 1071
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +2
Query: 140 RNAFTES*INNTTIMSEAQANENTCVVCFKNVLYYSIG---ECDHPVCFECSTRMRVLCL 310
R F++ I +I S + ++ C +C + + +C EC+T+ L
Sbjct: 1037 RKLFSQPNIVTASITS-TELDDTECAICLDEMTNFKETIKCQCRRRFHLECATKW--LNE 1093
Query: 311 QNECPICRKDLL 346
+ ECP CRK LL
Sbjct: 1094 KRECPTCRKLLL 1105
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +2
Query: 167 NNTTIMS--EAQANENTCVVCFKNVLYYSIG---ECDHPVCFECSTRMRVLCLQNECPIC 331
NNT +S ++ ++ C +C + + + EC +C+T+ L + ECP C
Sbjct: 425 NNTVTVSAPSSELDDTECAICLEEMYNFKETIKCECRRRFHSKCATKW--LNEKRECPTC 482
Query: 332 RKDLL 346
RK +L
Sbjct: 483 RKLML 487
>U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical
protein C32D5.10 protein.
Length = 610
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +2
Query: 188 EAQANENTCVVCFKNVL-YYSIGECDHPVCFECSTRMRVLCLQNECPICR 334
E E C VC ++ S+ +C H C++C CP+C+
Sbjct: 33 EIDEPEEECSVCKNEIIDTTSLSDCCHEFCYDCIVGWLTKGSGPFCPMCK 82
>AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical
protein Y6D1A.2 protein.
Length = 272
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 254 ECDHPVCFECSTRMRVLCLQNECPICRK 337
+C H +C EC TR+ +CP RK
Sbjct: 202 DCGHTICHECITRIHKPTEPFKCPFDRK 229
>AF016677-3|AAL11110.2| 216|Caenorhabditis elegans Hypothetical
protein ZK1240.9 protein.
Length = 216
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 254 ECDHPVCFECSTRMRVLCLQNECPICRK 337
+C H VC C+T++ + L CP CR+
Sbjct: 26 KCGHSVCQNCATQL-ITALLIICPFCRE 52
>AC024826-3|AAP13746.1| 343|Caenorhabditis elegans Hypothetical
protein Y55F3AM.6b protein.
Length = 343
Score = 29.1 bits (62), Expect = 4.4
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 18/108 (16%)
Frame = +2
Query: 167 NNTTIMSEA----QANENTCVVCFKNVL-----YYSIGECDHPVCFECSTRMRVLCLQN- 316
N+TT M A + + TC +C +N+ + + C H C +C + R +N
Sbjct: 194 NHTTEMERAFLLQKTEQKTCGICMENIFEKNLRFGILNGCQHCFCLDCIRQWRSKDQENV 253
Query: 317 --------ECPICRKDLLRVVFTDSIHPYKELGNRXIPXIDCLKDNTK 436
CP CR+ V+ S+ + E G I+ K+NTK
Sbjct: 254 ELATKTVRSCPECRQHSDYVI--PSLF-WVESGQEKDLLIEMYKENTK 298
>AC024826-2|AAF60798.1| 413|Caenorhabditis elegans Hypothetical
protein Y55F3AM.6a protein.
Length = 413
Score = 29.1 bits (62), Expect = 4.4
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 18/108 (16%)
Frame = +2
Query: 167 NNTTIMSEA----QANENTCVVCFKNVL-----YYSIGECDHPVCFECSTRMRVLCLQN- 316
N+TT M A + + TC +C +N+ + + C H C +C + R +N
Sbjct: 194 NHTTEMERAFLLQKTEQKTCGICMENIFEKNLRFGILNGCQHCFCLDCIRQWRSKDQENV 253
Query: 317 --------ECPICRKDLLRVVFTDSIHPYKELGNRXIPXIDCLKDNTK 436
CP CR+ V+ S+ + E G I+ K+NTK
Sbjct: 254 ELATKTVRSCPECRQHSDYVI--PSLF-WVESGQEKDLLIEMYKENTK 298
>Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical
protein F16A11.1 protein.
Length = 673
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 179 IMSEAQANENTCVVCFKNVLYYSIGECDHP-VCFECSTRMRVLCLQNECPICRKDL 343
++ + E+ C +CF ++ C+H C +C M + CP+CRK +
Sbjct: 553 LLEKEHIPEDYCTICFAAPGSTTLLPCNHDGFCSDCCNMM------DHCPLCRKPI 602
>U80442-6|AAB37669.1| 294|Caenorhabditis elegans Hypothetical
protein T20F5.7 protein.
Length = 294
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 7/56 (12%)
Frame = +2
Query: 209 TCVVCFKN----VLYYSIGECDHPVCFECSTRMR---VLCLQNECPICRKDLLRVV 355
TC++C + + C H VC EC+ +R L CP CR+ R V
Sbjct: 14 TCLICIREFDTKTRKPKVLHCGHTVCEECTDNLRDFNAPLLVVRCPTCRQFTKRPV 69
>U20864-11|AAV58867.1| 583|Caenorhabditis elegans C. elegans ADA-2
protein, isoform b protein.
Length = 583
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 218 VCFKNVLYYSIGECDHPVCFECSTRMRVLCLQ 313
VCF L + + H CFEC R+ +LC Q
Sbjct: 10 VCFNCTL--RVDQTIHVKCFECPLRICILCFQ 39
>U20864-10|AAK68355.1| 596|Caenorhabditis elegans C. elegans ADA-2
protein, isoform a protein.
Length = 596
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 218 VCFKNVLYYSIGECDHPVCFECSTRMRVLCLQ 313
VCF L + + H CFEC R+ +LC Q
Sbjct: 23 VCFNCTL--RVDQTIHVKCFECPLRICILCFQ 52
>AC024849-1|AAK68546.2| 374|Caenorhabditis elegans Hypothetical
protein Y67D8B.1 protein.
Length = 374
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 233 VLYYSIGECDHPVCFECSTRMRVLCLQNECPIC 331
+L +G C H +C C+T + N CPIC
Sbjct: 29 ILVPVLGACLHSICILCATGLE---SPNSCPIC 58
>Z81585-6|CAB04684.2| 482|Caenorhabditis elegans Hypothetical
protein T05E12.6a protein.
Length = 482
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -2
Query: 784 TNDSTSAPAQVTVQLVRIHE 725
TND+T+AP QVT QL R E
Sbjct: 79 TNDNTTAPVQVTDQLGRSEE 98
>Z75540-6|CAN86598.1| 584|Caenorhabditis elegans Hypothetical
protein F37D6.2c protein.
Length = 584
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +1
Query: 754 LAQEHL--YCHLCDADGQNSIMLHTPHXLHIS 843
+ Q+HL C++C+ D NSI L+T HIS
Sbjct: 266 MEQDHLDTTCNICELDFGNSIALNTHMKKHIS 297
>Z75540-3|CAD01084.1| 581|Caenorhabditis elegans Hypothetical
protein F37D6.2b protein.
Length = 581
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +1
Query: 754 LAQEHL--YCHLCDADGQNSIMLHTPHXLHIS 843
+ Q+HL C++C+ D NSI L+T HIS
Sbjct: 265 MEQDHLDTTCNICELDFGNSIALNTHMKKHIS 296
>Z75540-2|CAA99848.1| 582|Caenorhabditis elegans Hypothetical
protein F37D6.2a protein.
Length = 582
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +1
Query: 754 LAQEHL--YCHLCDADGQNSIMLHTPHXLHIS 843
+ Q+HL C++C+ D NSI L+T HIS
Sbjct: 266 MEQDHLDTTCNICELDFGNSIALNTHMKKHIS 297
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 212 CVVCFKNVLYYSIGECDHPVCFECSTRMRVLCLQNECPICR 334
C VC + I EC H C C L + +CP+CR
Sbjct: 8 CAVCLDFFVEPCIIECGHSYCRFCIESH--LNINEKCPLCR 46
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical protein
T05A12.4a protein.
Length = 1622
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 212 CVVCFKNVLYYSIGECDHPVCFECSTRMRVL 304
C +C ++ + + C H +C C +MR L
Sbjct: 1346 CPICCASIDCFMVFTCGHRICQNCFEKMRAL 1376
>AF040651-1|AAB95013.4| 691|Caenorhabditis elegans Nhl (ring finger
b-box coiled coil)domain containing protein 3 protein.
Length = 691
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Frame = +2
Query: 170 NTTIMSEAQANENTCVVCFK-NVLYYSIGECDHPVCFECSTRMRVLCLQNE-----CPIC 331
N SE +TC+ + N + C H VC C T++ L + + CP+C
Sbjct: 14 NVDDFSETFLTCSTCLYTYDGNTRKPKLLPCSHSVCLFCVTQLAELSPETQPPTLRCPLC 73
Query: 332 RK 337
R+
Sbjct: 74 RE 75
>AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical
protein C09E7.9 protein.
Length = 789
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +2
Query: 140 RNAFTES*INNTTIMSEAQANENTCVVCFKNVLYYSIG---ECDHPVCFECSTRMRVLCL 310
R F++ I ++ S + ++ C +C + + EC +C+T+ L
Sbjct: 712 RKLFSQPDIVTASVPS-TELDDTECAICLDEMTNFKETIKCECRRRFHLKCATKW--LNE 768
Query: 311 QNECPICRKDLL 346
+ ECP CRK LL
Sbjct: 769 KRECPTCRKLLL 780
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,854,006
Number of Sequences: 27780
Number of extensions: 421941
Number of successful extensions: 1424
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1424
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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