Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_N03
         (952 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003490-1|AAO39493.1|  388|Drosophila melanogaster SD27779p pro...    30   5.4  
AE014297-2477|AAF55521.1|  379|Drosophila melanogaster CG12320-P...    30   5.4  
AE014134-2525|AAS64710.1|  299|Drosophila melanogaster CG18420-P...    29   7.1  

>BT003490-1|AAO39493.1|  388|Drosophila melanogaster SD27779p
           protein.
          Length = 388

 Score = 29.9 bits (64), Expect = 5.4
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -3

Query: 176 FTFRAFSRWKMLSGDVTDSCHNKQTNTNKTXHCQRALSQC 57
           + +R   +WK L+G VT+SC ++   T  T      L  C
Sbjct: 138 YDYRYVVQWKELTGSVTESCVDRCRPTEGTIRTNIELQSC 177


>AE014297-2477|AAF55521.1|  379|Drosophila melanogaster CG12320-PA
           protein.
          Length = 379

 Score = 29.9 bits (64), Expect = 5.4
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -3

Query: 176 FTFRAFSRWKMLSGDVTDSCHNKQTNTNKTXHCQRALSQC 57
           + +R   +WK L+G VT+SC ++   T  T      L  C
Sbjct: 129 YDYRYVVQWKELTGSVTESCVDRCRPTEGTIRTNIELQSC 168


>AE014134-2525|AAS64710.1|  299|Drosophila melanogaster CG18420-PA
           protein.
          Length = 299

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -2

Query: 279 STVVRRMGPRSQRNRGLRDSHSPARPFEGN-TEPNVHLSGIFSLENV 142
           +T+V R+G  +++ +G R+ H   R F+    +PN H + I  L  V
Sbjct: 90  TTIVVRLGEYNRKLKGYREEHQVNRTFQHRFYDPNTHANDIALLRLV 136


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,926,658
Number of Sequences: 53049
Number of extensions: 398514
Number of successful extensions: 1149
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4730695893
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)