Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_N02
         (913 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0344 - 28576568-28576699,28576881-28576961,28577036-285771...    31   1.3  
03_02_0368 + 7840665-7841975                                           29   6.8  
01_01_0518 - 3810290-3810397,3810469-3810851,3810949-3811069           29   6.8  
05_02_0156 + 7163756-7163834,7165447-7166225                           28   9.0  
03_05_1144 + 30719953-30720456                                         28   9.0  
03_05_0142 - 21217375-21217518,21217851-21217899,21218191-212182...    28   9.0  

>01_06_0344 -
           28576568-28576699,28576881-28576961,28577036-28577131,
           28578862-28579038,28579633-28580130
          Length = 327

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -1

Query: 181 AAAXGTRPQTTGTXWR-QNQRRGQPKRKERNGGXAXGAG 68
           A A       +   W  + +RRG+ KRKER GG   G G
Sbjct: 77  AGAAAAAAVRSSADWHGRRRRRGKEKRKERGGGGGGGGG 115


>03_02_0368 + 7840665-7841975
          Length = 436

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +1

Query: 262 HTHRNGSKGLRIVPAQRXGTGAAKAPVQAKNCNVKCSD 375
           H HR GS G +  P +    G   A   A    V CSD
Sbjct: 35  HNHRGGSGGAKKTPRRAKSEGGGGADPAAYVAAVSCSD 72


>01_01_0518 - 3810290-3810397,3810469-3810851,3810949-3811069
          Length = 203

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 18/65 (27%), Positives = 26/65 (40%)
 Frame = -1

Query: 202 EXLRSXVAAAXGTRPQTTGTXWRQNQRRGQPKRKERNGGXAXGAGXGQERKXQXGKXARX 23
           E +R       G    ++G    + Q +   K++   GG A  AG GQE+     K  R 
Sbjct: 46  EEIRRVPEMGGGGGSASSGAGADERQGKEDGKQQGGGGGGAAAAGGGQEQAPPARKRGRS 105

Query: 22  XRQKE 8
              KE
Sbjct: 106 AGDKE 110


>05_02_0156 + 7163756-7163834,7165447-7166225
          Length = 285

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/22 (63%), Positives = 14/22 (63%)
 Frame = +2

Query: 230 RTRAAVPRPSRTRTVTARKAXG 295
           R RAA PRP R R V  RKA G
Sbjct: 101 RRRAAPPRPRRLRPVGHRKAPG 122


>03_05_1144 + 30719953-30720456
          Length = 167

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 133 QNQRRGQPKRKERNGGXAXGAGXGQ 59
           + +RR Q +RK R+GG   G G G+
Sbjct: 65  RRRRRRQRRRKSRSGGGGGGGGGGE 89


>03_05_0142 -
           21217375-21217518,21217851-21217899,21218191-21218258,
           21218368-21218413,21218548-21218641,21218775-21218837,
           21219018-21219171,21219414-21219476,21219568-21219681,
           21219779-21219844,21220813-21220870,21221859-21221932,
           21222045-21222110,21223139-21223187,21223483-21223550,
           21223660-21223705,21223908-21224001,21224117-21224179,
           21224290-21224412,21224503-21224536,21224906-21224968,
           21225825-21225911,21226293-21226370
          Length = 587

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 354 VLCLDWRLCCTSTGXLSWNNPXAF 283
           V+CL W + C S   + W +P A+
Sbjct: 131 VICLFWNIICVSAIAIMWGDPRAW 154


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,163,013
Number of Sequences: 37544
Number of extensions: 305924
Number of successful extensions: 930
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)