Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_N01
(1014 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 36 0.002
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 36 0.003
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 36 0.003
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 35 0.004
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 33 0.018
AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled ... 31 0.055
AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein... 31 0.055
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 29 0.22
AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP prot... 27 1.2
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 23 1.4
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 26 1.6
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 25 2.7
AY578797-1|AAT07302.1| 304|Anopheles gambiae activin protein. 25 3.6
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 25 3.6
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 25 3.6
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 25 3.6
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 25 4.8
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 25 4.8
AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 25 4.8
AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein hom... 25 4.8
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 35.9 bits (79), Expect = 0.002
Identities = 23/55 (41%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = -2
Query: 863 GGGXXGGGGXRGGXGXXGXRVXPGGXGXGVG---XXGGGXRXRXXGXGAGWXGGG 708
GGG GGG GG G G PGG G G G R R G G GGG
Sbjct: 203 GGGGSGGGAPGGGGGSSGG-PGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGGG 256
Score = 31.1 bits (67), Expect = 0.055
Identities = 26/74 (35%), Positives = 26/74 (35%), Gaps = 12/74 (16%)
Frame = -2
Query: 863 GGGXXGGGGXRGGXGXXGXR------------VXPGGXGXGVGXXGGGXRXRXXGXGAGW 720
GGG GGGG G R GG G G G GGG G G G
Sbjct: 168 GGGGGGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGG-GSSGGPGPGG 226
Query: 719 XGGGXXRARXGXSR 678
GGG R R R
Sbjct: 227 GGGGGGRDRDHRDR 240
Score = 29.5 bits (63), Expect = 0.17
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = -3
Query: 793 GXGGXGWGEXXGGGGXGXWGXGRXGXGXGXXGRGGG 686
G GG G G GGG G G G G G G GGG
Sbjct: 201 GAGGGGSGGGAPGGGGGSSG----GPGPGGGGGGGG 232
Score = 29.5 bits (63), Expect = 0.17
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 760 GGGGXGXWGXGRXGXGXGXXGRGGGXAG 677
GGGG G G G G G GGG G
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGGGGG 230
Score = 29.5 bits (63), Expect = 0.17
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 1012 GGGMRXXXGGGGGGXXGGXGXXXXAGAG 929
GGG GGGGG GG G G G
Sbjct: 204 GGGSGGGAPGGGGGSSGGPGPGGGGGGG 231
Score = 27.5 bits (58), Expect = 0.68
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 1009 GGMRXXXGGGGGGXXGGXG 953
GG GGGGGG GG G
Sbjct: 162 GGRSSSGGGGGGGGGGGAG 180
Score = 26.6 bits (56), Expect = 1.2
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 772 GEXXGGGGXGXWGXGRXGXGXGXXGRGGGXAG 677
G GG G G G G G G GGG G
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGG 232
Score = 25.8 bits (54), Expect = 2.1
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -3
Query: 793 GXGGXGWGEXXGGGGXGXWGXGRXGXGXGXXGRGGGXAG 677
G GG G GGGG G G R GGG G
Sbjct: 214 GGGGSSGGPGPGGGGGG-GGRDRDHRDRDREREGGGNGG 251
Score = 25.4 bits (53), Expect = 2.7
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = -2
Query: 923 GXGXGGXXXXXXXXXXXXGXGGGXXGGGGXRGGXGXXGXRVXPGGXGXGVGXXGGGXRXR 744
G G GG G G GGGG G R G G GGG +
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGGGMQLD 260
Query: 743 XXG 735
G
Sbjct: 261 GRG 263
Score = 25.4 bits (53), Expect = 2.7
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -1
Query: 1014 GGGGCGXXXGXGGEVXXGGXXAXXXRGRGGGGXXR 910
GGGG G GG GG G GGGG R
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGG--GGGGGGRDR 235
Score = 24.6 bits (51), Expect = 4.8
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 501 GGGGGGXXGXGXGA 460
GGGGGG G G G+
Sbjct: 168 GGGGGGGGGGGAGS 181
Score = 24.6 bits (51), Expect = 4.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 1012 GGGMRXXXGGGGGGXXGG 959
GGG G GGGG GG
Sbjct: 215 GGGSSGGPGPGGGGGGGG 232
Score = 24.6 bits (51), Expect = 4.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -3
Query: 787 GGXGWGEXXGGGGXGXWGXGRXGXGXGXXGRGGGXAG 677
GG G G GGGG R G GGG G
Sbjct: 220 GGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGGG 256
Score = 24.2 bits (50), Expect = 6.3
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 1006 GMRXXXGGGGGGXXGGXGXXXXAGA 932
G R GGGGGG GG G A A
Sbjct: 162 GGRSSSGGGGGG-GGGGGAGSFAAA 185
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 35.5 bits (78), Expect = 0.003
Identities = 21/58 (36%), Positives = 21/58 (36%)
Frame = -2
Query: 860 GGXXGGGGXRGGXGXXGXRVXPGGXGXGVGXXGGGXRXRXXGXGAGWXGGGXXRARXG 687
GG GG G G G GG G G G G G G GGG RA G
Sbjct: 517 GGGGGGSGCVNGSRTVGAGGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGG 574
Score = 32.7 bits (71), Expect = 0.018
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = -2
Query: 860 GGXXGGGGXRGGXGXXGXRVXPGG-XGXGVGXXGGGXRXRXXGXGAGWXGGG 708
GG GGGG G P G G G GG R G G G GGG
Sbjct: 812 GGNGGGGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGG 863
Score = 32.3 bits (70), Expect = 0.024
Identities = 19/50 (38%), Positives = 20/50 (40%)
Frame = -2
Query: 863 GGGXXGGGGXRGGXGXXGXRVXPGGXGXGVGXXGGGXRXRXXGXGAGWXG 714
G G GGG G R GG G G+G GGG G G G G
Sbjct: 533 GAGGMAGGGSDGPEYEGAGR---GGVGSGIGGGGGGGGGGRAGGGVGATG 579
Score = 31.5 bits (68), Expect = 0.042
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -3
Query: 1012 GGGMRXXXGGGGGGXXGGXGXXXXAGAG 929
GG +R GG GGG GG G +G G
Sbjct: 845 GGPLRGSSGGAGGGSSGGGGSGGTSGGG 872
Score = 31.1 bits (67), Expect = 0.055
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = -2
Query: 923 GXGXGGXXXXXXXXXXXXGXGGGXXGGGGXRGGXGXXGXRVXPGGXGXGVGXXGGG 756
G G G GGG G G G G + GG G G G GGG
Sbjct: 519 GGGGSGCVNGSRTVGAGGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGG 574
Score = 31.1 bits (67), Expect = 0.055
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -3
Query: 778 GWGEXXGGGGXG--XWGXGRXGXGXGXXGRGGGXAG 677
G G GGG G G GR G G G G GGG G
Sbjct: 533 GAGGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGGGG 568
Score = 29.5 bits (63), Expect = 0.17
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -2
Query: 863 GGGXXGGGGXRGGXGXXGXRVXPGGXGXGVGXXGGGXRXRXXGXGAGWXGGG 708
G G GG GG G G G G GGG G G G GGG
Sbjct: 528 GSRTVGAGGMAGGGSDGPEYEGAGRGGVGSGIGGGG-----GGGGGGRAGGG 574
Score = 29.1 bits (62), Expect = 0.22
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 863 GGGXXGGGGXRGGXGXXGXRVXP 795
GGG GGGG GG G G P
Sbjct: 292 GGGVGGGGGGGGGGGGGGGSAGP 314
Score = 29.1 bits (62), Expect = 0.22
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 759 GXAGPXXGGRGGXGGGXXXQGAXGG 685
G GP G GG GGG G GG
Sbjct: 843 GAGGPLRGSSGGAGGGSSGGGGSGG 867
Score = 28.3 bits (60), Expect = 0.39
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 1012 GGGMRXXXGGGGGGXXGG 959
GGG+ GGGGGG GG
Sbjct: 292 GGGVGGGGGGGGGGGGGG 309
Score = 28.3 bits (60), Expect = 0.39
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -3
Query: 787 GGXGWGEXXGGGGXGXWGXG-RXGXGXGXXGRGGGXAG 677
GG G G G G G G G G G GR GG G
Sbjct: 539 GGGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGGVG 576
Score = 28.3 bits (60), Expect = 0.39
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = -2
Query: 863 GGGXXGGG-GXRGGXGXXGXRVXPGGXGXGVGXXGGGXRXRXXGXGA 726
GGG GGG G GG G G GG G GGG GA
Sbjct: 672 GGGAVGGGSGAGGGAGSSGG--SGGGLASGSPYGGGGHHLSHHHGGA 716
Score = 27.5 bits (58), Expect = 0.68
Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
Frame = -2
Query: 863 GGGXXGGGGXRGGXGXXGXRVXPGGXGXG---VGXXGGGXRXRXXGXGAGWXGGG 708
GGG GG G + GG G G G GG G G+G GG
Sbjct: 817 GGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGGGSGGTSGG 871
Score = 27.5 bits (58), Expect = 0.68
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -2
Query: 923 GXGXGGXXXXXXXXXXXXGXGGGXXGGGGXRGGXGXXGXRVXPGGXGXGVGXXGGG 756
G G G GG GG RG G G GG G G G GGG
Sbjct: 819 GAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGG-SSGGGGSG-GTSGGG 872
Score = 26.2 bits (55), Expect = 1.6
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -3
Query: 1009 GGMRXXXGGGGGGXXGGXGXXXXAGAG 929
GG+ GGGGGG GG G
Sbjct: 553 GGVGSGIGGGGGGGGGGRAGGGVGATG 579
Score = 25.8 bits (54), Expect = 2.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 1012 GGGMRXXXGGGGGGXXGG 959
G G+ GGGGGG GG
Sbjct: 556 GSGIGGGGGGGGGGRAGG 573
Score = 25.8 bits (54), Expect = 2.1
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 501 GGGGGGXXGXGXGA 460
GGGGGG G G GA
Sbjct: 564 GGGGGGRAGGGVGA 577
Score = 25.0 bits (52), Expect = 3.6
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -3
Query: 772 GEXXGGGGXGXWGXG--RXGXGXGXXGRGGGXAG 677
G GGGG G G G G G GGG AG
Sbjct: 812 GGNGGGGGAGASGGGFLITGDPSDTIGAGGGGAG 845
Score = 25.0 bits (52), Expect = 3.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 760 GGGGXGXWGXGRXGXGXGXXGRGGGXAG 677
GGGG G G G G GGG G
Sbjct: 840 GGGGAGGPLRGSSGGAGGGSSGGGGSGG 867
Score = 24.6 bits (51), Expect = 4.8
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 501 GGGGGGXXGXGXGA 460
GGGGGG G G G+
Sbjct: 298 GGGGGGGGGGGGGS 311
Score = 24.2 bits (50), Expect = 6.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 738 GGRGGXGGGXXXQGAXGG 685
GG GG GGG G GG
Sbjct: 293 GGVGGGGGGGGGGGGGGG 310
Score = 24.2 bits (50), Expect = 6.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 513 VAXXGGGGGGXXGXGXGA 460
V GGGGGG G G A
Sbjct: 295 VGGGGGGGGGGGGGGGSA 312
Score = 24.2 bits (50), Expect = 6.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 787 GGXGWGEXXGGGGXGXWGXGRXGXGXGXXGRGGG 686
GG G GGG G G G G GGG
Sbjct: 673 GGAVGGGSGAGGGAGSSGGSGGGLASGSPYGGGG 706
Score = 23.8 bits (49), Expect = 8.3
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = -3
Query: 1012 GGGMRXXXGGGGGGXXGGXGXXXXAGAG 929
G G G GGG GG G G G
Sbjct: 549 GAGRGGVGSGIGGGGGGGGGGRAGGGVG 576
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 35.5 bits (78), Expect = 0.003
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = -2
Query: 863 GGGXXGGGGXRGGXGXXGXRVXPGGXGXGVGXXGGG 756
GGG GGGG G G G GG G G GGG
Sbjct: 655 GGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGG 690
Score = 30.7 bits (66), Expect = 0.073
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -2
Query: 803 VXPGGXGXGVGXXGGGXRXRXXGXGAGWXGGGXXRAR 693
V PG G G G GGG G G+ GGG R
Sbjct: 648 VSPGSGGGGGGGGGGGGSVGSGGIGSSSLGGGGGSGR 684
Score = 30.7 bits (66), Expect = 0.073
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -2
Query: 848 GGGGXRGGXGXXGXRVXPGGXGXGVGXXGGGXRXRXXGXG 729
G GG GG G G V GG G GGG G G
Sbjct: 651 GSGGGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGG 690
Score = 30.3 bits (65), Expect = 0.096
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -1
Query: 1011 GGGCGXXXGXGGEVXXGGXXAXXXRGRGGGG 919
GGG G G GG V GG + G GG G
Sbjct: 653 GGGGGGGGGGGGSVGSGGIGSSSLGGGGGSG 683
Score = 29.9 bits (64), Expect = 0.13
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -3
Query: 784 GXGWGEXXGGGGXGXWGXGRXGXGXGXXGRGGG 686
G G G GGGG G G G G G G GGG
Sbjct: 651 GSGGGGGGGGGGGGSVGSG--GIGSSSLGGGGG 681
Score = 29.1 bits (62), Expect = 0.22
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 863 GGGXXGGGGXRGGXGXXGXRVXP 795
GGG GGGG GG G G P
Sbjct: 292 GGGVGGGGGGGGGGGGGGGSAGP 314
Score = 28.3 bits (60), Expect = 0.39
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 1012 GGGMRXXXGGGGGGXXGG 959
GGG+ GGGGGG GG
Sbjct: 292 GGGVGGGGGGGGGGGGGG 309
Score = 27.5 bits (58), Expect = 0.68
Identities = 19/70 (27%), Positives = 20/70 (28%)
Frame = -2
Query: 917 GXGGXXXXXXXXXXXXGXGGGXXGGGGXRGGXGXXGXRVXPGGXGXGVGXXGGGXRXRXX 738
G GG G G GGGG G G + G GG
Sbjct: 654 GGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGGMIGMHSVAAGAAVAAGGGVAGMM 713
Query: 737 GXGAGWXGGG 708
GAG GG
Sbjct: 714 STGAGVNRGG 723
Score = 25.0 bits (52), Expect = 3.6
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -2
Query: 794 GGXGXGVGXXGGGXRXRXXGXGAGWXGGGXXRARXG 687
GG G G G GG G + GGG R+ G
Sbjct: 653 GGGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSG 688
Score = 24.6 bits (51), Expect = 4.8
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 501 GGGGGGXXGXGXGA 460
GGGGGG G G G+
Sbjct: 298 GGGGGGGGGGGGGS 311
Score = 24.2 bits (50), Expect = 6.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 738 GGRGGXGGGXXXQGAXGG 685
GG GG GGG G GG
Sbjct: 293 GGVGGGGGGGGGGGGGGG 310
Score = 24.2 bits (50), Expect = 6.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 513 VAXXGGGGGGXXGXGXGA 460
V GGGGGG G G A
Sbjct: 295 VGGGGGGGGGGGGGGGSA 312
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 34.7 bits (76), Expect = 0.004
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = +1
Query: 700 LXXPPPXXPAPXPXXRXRXPPPSXPTPXPXPPGXTRXPXXPXPPLXPPPPXXPPP 864
L PP P P R P + P P G P PP PPPP PP
Sbjct: 541 LNIPPQFLPPPLNLLRAPFFPLN-PAQLRFPAGFPNLPNAQPPPAPPPPPPMGPP 594
Score = 29.9 bits (64), Expect = 0.13
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 715 PXXPAPXPXXRXRXPPPSXPTPXPXPPGXTRXPXXPXPPL 834
P P P PPP P P P G P PPL
Sbjct: 574 PNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPL 613
Score = 26.2 bits (55), Expect = 1.6
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +1
Query: 709 PPPXXPAPXPXXRXRXPPPSXPTPXPXPPGXTRXPXXPXPPLXPPPP 849
PPP P P P P P P PP PPP
Sbjct: 549 PPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPPMGPPP 595
Score = 26.2 bits (55), Expect = 1.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 960 PPX*PPPPPPXXXRIPPP 1013
PP PPPPPP PPP
Sbjct: 581 PPPAPPPPPPMG---PPP 595
Score = 25.8 bits (54), Expect = 2.1
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +2
Query: 476 PXXPPPPPPXXATSXXXPP 532
P PPPPPP PP
Sbjct: 527 PLGPPPPPPPGGAVLNIPP 545
Score = 25.4 bits (53), Expect = 2.7
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Frame = +3
Query: 681 AXPPPRPXXPXPXPXRPXPXXPXP-PPPXXSPHPXP 785
A PPP P P P P P P P S P P
Sbjct: 579 AQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614
Score = 24.6 bits (51), Expect = 4.8
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +3
Query: 708 PXPXPXRPXPXXPXPPPPXXSPHPXPPXPR 797
P P P P P P P P P P R
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPLGGPAGSR 610
Score = 23.8 bits (49), Expect = 8.3
Identities = 12/34 (35%), Positives = 13/34 (38%), Gaps = 2/34 (5%)
Frame = +3
Query: 690 PPRPXXPXPXPXRPXPXXP--XPPPPXXSPHPXP 785
P + P P P P PPPP P P P
Sbjct: 564 PAQLRFPAGFPNLPNAQPPPAPPPPPPMGPPPSP 597
Score = 23.8 bits (49), Expect = 8.3
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +2
Query: 698 PXXXXPPPXPPRPPXXGPAXP 760
P PP PP PP P P
Sbjct: 577 PNAQPPPAPPPPPPMGPPPSP 597
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 32.7 bits (71), Expect = 0.018
Identities = 23/56 (41%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = -2
Query: 863 GGGXXG-GGGXRGGXGXXGXRVXPGGXGXGVGXXGGGXRXRXXGXGAGWXGGGXXR 699
GGG G GGG RGG G G GG G G G G G G G G R
Sbjct: 58 GGGDDGYGGGGRGGRGGRG-----GGRGRGRGRGGRDGGGGFGGGGYGDRNGDGGR 108
Score = 31.1 bits (67), Expect = 0.055
Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -3
Query: 793 GXGGXGWGEXXGGGGXGXWGXGRXGXGXGXXGR--GGGXAG 677
G G G+G G GG G G GR G G G GR GGG G
Sbjct: 58 GGGDDGYG-GGGRGGRGGRGGGR-GRGRGRGGRDGGGGFGG 96
Score = 30.7 bits (66), Expect = 0.073
Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = -3
Query: 787 GGXGWG-EXXGGGGXGXWG--XGRXGXGXGXXGRGGG 686
GG G G + GGGG G G G G G G GR GG
Sbjct: 55 GGYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGG 91
Score = 28.7 bits (61), Expect = 0.29
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -1
Query: 1014 GGGGCGXXXGXGGEVXXGGXXAXXXRGRGGGGXXRG 907
G GG G GG GG RGRG GG G
Sbjct: 56 GYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGG 91
Score = 27.5 bits (58), Expect = 0.68
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 1012 GGGMRXXXGGGGGGXXGGXGXXXXAGAG 929
GGG R GG GGG G G G G
Sbjct: 65 GGGGRGGRGGRGGGRGRGRGRGGRDGGG 92
Score = 25.8 bits (54), Expect = 2.1
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 794 GGXGXGVGXXGGGXRXRXXGXGAGWXGGGXXRARXG 687
GG G G GGG R G G G G R G
Sbjct: 55 GGYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDG 90
Score = 24.2 bits (50), Expect = 6.3
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -1
Query: 1011 GGGCGXXXGXGGEVXXGGXXAXXXRGRGGGG 919
GGG G G GG GG R G G
Sbjct: 76 GGGRGRGRGRGGRDGGGGFGGGGYGDRNGDG 106
>AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled
receptor protein.
Length = 611
Score = 31.1 bits (67), Expect = 0.055
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 1012 GGGMRXXXGGGGGGXXGGXGXXXXAGAG 929
GGG GGGGGG GG G AG
Sbjct: 553 GGGGGGGGGGGGGGVGGGIGLSLGGAAG 580
Score = 26.6 bits (56), Expect = 1.2
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -2
Query: 863 GGGXXGGGGXRGGXGXXGXRVXPGGXGXGVGXXGG 759
GGG GGGG GG G G GG G +G G
Sbjct: 553 GGGGGGGGG--GGGGGVG-----GGIGLSLGGAAG 580
Score = 25.8 bits (54), Expect = 2.1
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 845 GGGXRGGXGXXGXRVXPGGXGXGVGXXGGG 756
GGG GG G G GG G G+G GG
Sbjct: 553 GGGGGGGGGGGG-----GGVGGGIGLSLGG 577
Score = 25.0 bits (52), Expect = 3.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 501 GGGGGGXXGXGXGAXV 454
GGGGGG G G G +
Sbjct: 556 GGGGGGGGGGGVGGGI 571
Score = 24.6 bits (51), Expect = 4.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 516 EVAXXGGGGGGXXGXGXG 463
++ GGGGGG G G G
Sbjct: 548 QIHQKGGGGGGGGGGGGG 565
Score = 24.2 bits (50), Expect = 6.3
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 501 GGGGGGXXGXGXG 463
GGGGGG G G G
Sbjct: 554 GGGGGGGGGGGGG 566
Score = 24.2 bits (50), Expect = 6.3
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 501 GGGGGGXXGXGXG 463
GGGGGG G G G
Sbjct: 560 GGGGGGGVGGGIG 572
>AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 612
Score = 31.1 bits (67), Expect = 0.055
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 1012 GGGMRXXXGGGGGGXXGGXGXXXXAGAG 929
GGG GGGGGG GG G AG
Sbjct: 554 GGGGGGGGGGGGGGVGGGIGLSLGGAAG 581
Score = 26.6 bits (56), Expect = 1.2
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -2
Query: 863 GGGXXGGGGXRGGXGXXGXRVXPGGXGXGVGXXGG 759
GGG GGGG GG G G GG G +G G
Sbjct: 554 GGGGGGGGG--GGGGGVG-----GGIGLSLGGAAG 581
Score = 25.8 bits (54), Expect = 2.1
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 845 GGGXRGGXGXXGXRVXPGGXGXGVGXXGGG 756
GGG GG G G GG G G+G GG
Sbjct: 554 GGGGGGGGGGGG-----GGVGGGIGLSLGG 578
Score = 25.0 bits (52), Expect = 3.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 501 GGGGGGXXGXGXGAXV 454
GGGGGG G G G +
Sbjct: 557 GGGGGGGGGGGVGGGI 572
Score = 24.6 bits (51), Expect = 4.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 516 EVAXXGGGGGGXXGXGXG 463
++ GGGGGG G G G
Sbjct: 549 QIHQKGGGGGGGGGGGGG 566
Score = 24.2 bits (50), Expect = 6.3
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 501 GGGGGGXXGXGXG 463
GGGGGG G G G
Sbjct: 555 GGGGGGGGGGGGG 567
Score = 24.2 bits (50), Expect = 6.3
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 501 GGGGGGXXGXGXG 463
GGGGGG G G G
Sbjct: 561 GGGGGGGVGGGIG 573
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 29.1 bits (62), Expect = 0.22
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 863 GGGXXGGGGXRGGXGXXGXRVXP 795
GGG GGGG GG G G P
Sbjct: 244 GGGVGGGGGGGGGGGGGGGSAGP 266
Score = 28.3 bits (60), Expect = 0.39
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 1012 GGGMRXXXGGGGGGXXGG 959
GGG+ GGGGGG GG
Sbjct: 244 GGGVGGGGGGGGGGGGGG 261
Score = 24.6 bits (51), Expect = 4.8
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 501 GGGGGGXXGXGXGA 460
GGGGGG G G G+
Sbjct: 250 GGGGGGGGGGGGGS 263
Score = 24.2 bits (50), Expect = 6.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 738 GGRGGXGGGXXXQGAXGG 685
GG GG GGG G GG
Sbjct: 245 GGVGGGGGGGGGGGGGGG 262
Score = 24.2 bits (50), Expect = 6.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 513 VAXXGGGGGGXXGXGXGA 460
V GGGGGG G G A
Sbjct: 247 VGGGGGGGGGGGGGGGSA 264
>AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP
protein.
Length = 151
Score = 26.6 bits (56), Expect = 1.2
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +1
Query: 715 PXXPAPXPXXRXRXPPPSXPTPXPXPPGXTRXPXXPXPPLXPPPPXXPP 861
P P P P R PP PT P G P P + PP P
Sbjct: 105 PNGPLPPPMMGMRPPPMMVPTMGMPPMGLGMRP----PVMSAAPPQLNP 149
Score = 25.4 bits (53), Expect = 2.7
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 5/57 (8%)
Frame = +1
Query: 709 PPPXXPAPXPXXRXRXPPPSXPTPX-----PXPPGXTRXPXXPXPPLXPPPPXXPPP 864
P P P P PPP+ P P PG P PL PP PP
Sbjct: 64 PNPFTAGP-PKPNISIPPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPP 119
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 23.0 bits (47), Expect(2) = 2.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 838 PPPPXXPPP 864
PPPP PPP
Sbjct: 783 PPPPPPPPP 791
Score = 22.6 bits (46), Expect(2) = 1.4
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 972 PPPPPPXXXRIPP 1010
PPPPPP + P
Sbjct: 784 PPPPPPPPSSLSP 796
Score = 21.8 bits (44), Expect(2) = 1.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 963 PX*PPPPPP 989
P PPPPPP
Sbjct: 783 PPPPPPPPP 791
Score = 20.6 bits (41), Expect(2) = 2.3
Identities = 10/28 (35%), Positives = 10/28 (35%)
Frame = +1
Query: 766 SXPTPXPXPPGXTRXPXXPXPPLXPPPP 849
S T P P PP PPPP
Sbjct: 763 SVSTGMPSPSRSAFADGIGSPPPPPPPP 790
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 26.2 bits (55), Expect = 1.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 988 GGGGGGXXGGXGXXXXAGA 932
GGGGGG GG G +G+
Sbjct: 548 GGGGGGGGGGGGGVIGSGS 566
Score = 25.8 bits (54), Expect = 2.1
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 510 AXXGGGGGGXXGXGXGAXV 454
A GGGGGG G G G +
Sbjct: 544 AGVGGGGGGGGGGGGGGVI 562
Score = 25.4 bits (53), Expect = 2.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 985 GGGGGXXGGXGXXXXAGAG 929
GGGGG GG G G+G
Sbjct: 547 GGGGGGGGGGGGGGVIGSG 565
Score = 24.6 bits (51), Expect = 4.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 988 GGGGGGXXGGXG 953
GGGGGG GG G
Sbjct: 547 GGGGGGGGGGGG 558
Score = 24.2 bits (50), Expect = 6.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 1012 GGGMRXXXGGGGGGXXG 962
GGG GGGGGG G
Sbjct: 547 GGGGGGGGGGGGGGVIG 563
Score = 23.8 bits (49), Expect = 8.3
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -2
Query: 803 VXPGGXGXGVGXXGGGXRXRXXGXGA 726
V P G G G G GGG G G+
Sbjct: 541 VGPAGVGGGGGGGGGGGGGGVIGSGS 566
Score = 23.8 bits (49), Expect = 8.3
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 863 GGGXXGGGGXRGG 825
GGG GGGG GG
Sbjct: 547 GGGGGGGGGGGGG 559
Score = 23.8 bits (49), Expect = 8.3
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 863 GGGXXGGGGXRGG 825
GGG GGGG GG
Sbjct: 548 GGGGGGGGGGGGG 560
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 25.4 bits (53), Expect = 2.7
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 860 GGXXGGGGXRGGXGXXGXRVXPGGXGXGVGXXGG 759
G GGG G G G GG G G G GG
Sbjct: 179 GTTNGGGELTTGGGTNGC-TKAGGGGGGTGTGGG 211
Score = 25.0 bits (52), Expect = 3.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 1003 MRXXXGGGGGGXXGGXG 953
M GGGGGG GG G
Sbjct: 944 MTGVGGGGGGGSAGGAG 960
>AY578797-1|AAT07302.1| 304|Anopheles gambiae activin protein.
Length = 304
Score = 25.0 bits (52), Expect = 3.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 1009 GGMRXXXGGGGGGXXGG 959
G M GGGGGG GG
Sbjct: 242 GKMHHKAGGGGGGGAGG 258
Score = 25.0 bits (52), Expect = 3.6
Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = -1
Query: 501 GGGGGGXXGXGXG-AXVXXC 445
GGGGGG G G G A + C
Sbjct: 249 GGGGGGGAGGGAGLAGIHQC 268
Score = 24.6 bits (51), Expect = 4.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 988 GGGGGGXXGGXG 953
GGGGGG GG G
Sbjct: 250 GGGGGGAGGGAG 261
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 25.0 bits (52), Expect = 3.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 1012 GGGMRXXXGGGGGGXXGG 959
GG GGGGGG GG
Sbjct: 939 GGNKDVLDGGGGGGGGGG 956
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 25.0 bits (52), Expect = 3.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 1012 GGGMRXXXGGGGGGXXGG 959
GG GGGGGG GG
Sbjct: 938 GGNKDVLDGGGGGGGGGG 955
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 25.0 bits (52), Expect = 3.6
Identities = 13/34 (38%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Frame = +3
Query: 690 PPRPXXPX-PXPXRPXPXXPXPPPPXXSPHPXPP 788
PPR P P P RP P PP P P
Sbjct: 200 PPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMP 233
Score = 25.0 bits (52), Expect = 3.6
Identities = 18/70 (25%), Positives = 20/70 (28%)
Frame = +1
Query: 709 PPPXXPAPXPXXRXRXPPPSXPTPXPXPPGXTRXPXXPXPPLXPPPPXXPPPXXXXXXXX 888
PP P P + R PPS P P P P+ P P P
Sbjct: 233 PPGAVPGMQPGMQPR--PPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISPQNSNLSGGM 290
Query: 889 XXXXXXPPXP 918
PP P
Sbjct: 291 PSGMVGPPRP 300
Score = 24.6 bits (51), Expect = 4.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 863 GGGXXGGGGXRGGXGXXGXRVXP 795
GGG GGGG R G R P
Sbjct: 529 GGGGGGGGGGREGSQEWNSRSRP 551
Score = 23.8 bits (49), Expect = 8.3
Identities = 17/58 (29%), Positives = 17/58 (29%), Gaps = 2/58 (3%)
Frame = +1
Query: 682 LXPXRALXXPPPXX--PAPXPXXRXRXPPPSXPTPXPXPPGXTRXPXXPXPPLXPPPP 849
L P PPP AP R P P P P P P P PP
Sbjct: 155 LFPAPISHRPPPIAHQQAPFAMDPARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPP 212
Score = 23.8 bits (49), Expect = 8.3
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +3
Query: 693 PRPXXPXPXPXRPXPXXPXPPPPXXSP-HPXPPXP 794
P P P P P P PP +P P PP P
Sbjct: 181 PNPGMP-PGPQMMRPPGNVGPPRTGTPTQPQPPRP 214
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 24.6 bits (51), Expect = 4.8
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 3/61 (4%)
Frame = -2
Query: 860 GGXXGGGGXRG---GXGXXGXRVXPGGXGXGVGXXGGGXRXRXXGXGAGWXGGGXXRARX 690
GG GGGG G G G R G GGG R R G G
Sbjct: 916 GGEVGGGGGSGGEEGSGAPKERKRKGEKKPRKSQGGGGSRKRKEKARRGSGGDSDSEEEE 975
Query: 689 G 687
G
Sbjct: 976 G 976
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 24.6 bits (51), Expect = 4.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 1009 GGMRXXXGGGGGGXXGGXG 953
GG GGGGG GG G
Sbjct: 1487 GGSPTKGAGGGGGGGGGKG 1505
Score = 23.8 bits (49), Expect = 8.3
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 531 GGXXXEVAXXGGGGGGXXG 475
GG + A GGGGGG G
Sbjct: 1487 GGSPTKGAGGGGGGGGGKG 1505
>AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative
transcription factor protein.
Length = 593
Score = 24.6 bits (51), Expect = 4.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 988 GGGGGGXXGGXG 953
GGGGGG GG G
Sbjct: 14 GGGGGGGGGGGG 25
Score = 24.2 bits (50), Expect = 6.3
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 1003 MRXXXGGGGGGXXGG 959
+R GGGGGG GG
Sbjct: 11 LRAGGGGGGGGGGGG 25
>AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein
homolog protein.
Length = 394
Score = 24.6 bits (51), Expect = 4.8
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = -2
Query: 863 GGGXXGGGGXRGGXGXXGXRVXPGGXGXGVGXXGGGXRXRXXGXGAGWXGGGXXRA 696
G G G GG GG G G G + G G G GG A
Sbjct: 92 GAGGTGSGGSGGGSGGIGSGALHLGQNPNLHHHHHHHHHGNNGGGNGGGGGSGGNA 147
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,811
Number of Sequences: 2352
Number of extensions: 14820
Number of successful extensions: 559
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 334
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 111818928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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