Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_M24
(915 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC053853-1|AAH53853.1| 291|Homo sapiens PHYHD1 protein protein. 86 1e-16
AL672142-6|CAI10842.1| 291|Homo sapiens phytanoyl-CoA dioxygena... 86 1e-16
AL672142-4|CAI10840.1| 177|Homo sapiens phytanoyl-CoA dioxygena... 63 2e-09
BC051300-1|AAH51300.1| 270|Homo sapiens PHYHD1 protein protein. 54 1e-06
AL672142-5|CAI10841.1| 255|Homo sapiens phytanoyl-CoA dioxygena... 54 1e-06
BC009373-1|AAH09373.1| 297|Homo sapiens phytanoyl-CoA dioxygena... 48 4e-05
AL672142-7|CAI10843.1| 297|Homo sapiens phytanoyl-CoA dioxygena... 48 4e-05
>BC053853-1|AAH53853.1| 291|Homo sapiens PHYHD1 protein protein.
Length = 291
Score = 86.2 bits (204), Expect = 1e-16
Identities = 49/137 (35%), Positives = 59/137 (43%), Gaps = 1/137 (0%)
Frame = +3
Query: 309 FLXSXXXXXCFFEXGAXXADGXLTVXPXXSLNXVGXALXLLXPIFXCXXYXXRVXXXCXX 488
FL S FFE G G V P S+N +G AL P+F + +V
Sbjct: 70 FLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHSFKVQTLARS 129
Query: 489 LGFIXPAVVXXXYIFXXPGXGSEVVAXPXAXYLYXXPXPPV-GFWXALEXAPVXNGCLWL 665
LG P VV YIF P G EV A +LY P V G W A+E A + NGCLW
Sbjct: 130 LGLQMPVVVQSMYIFKQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWF 189
Query: 666 XXXXXXXXVPXRLIRXP 716
V R++R P
Sbjct: 190 IPGSHTSGVSRRMVRAP 206
>AL672142-6|CAI10842.1| 291|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 291
Score = 86.2 bits (204), Expect = 1e-16
Identities = 49/137 (35%), Positives = 59/137 (43%), Gaps = 1/137 (0%)
Frame = +3
Query: 309 FLXSXXXXXCFFEXGAXXADGXLTVXPXXSLNXVGXALXLLXPIFXCXXYXXRVXXXCXX 488
FL S FFE G G V P S+N +G AL P+F + +V
Sbjct: 70 FLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHSFKVQTLARS 129
Query: 489 LGFIXPAVVXXXYIFXXPGXGSEVVAXPXAXYLYXXPXPPV-GFWXALEXAPVXNGCLWL 665
LG P VV YIF P G EV A +LY P V G W A+E A + NGCLW
Sbjct: 130 LGLQMPVVVQSMYIFKQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWF 189
Query: 666 XXXXXXXXVPXRLIRXP 716
V R++R P
Sbjct: 190 IPGSHTSGVSRRMVRAP 206
>AL672142-4|CAI10840.1| 177|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 177
Score = 62.9 bits (146), Expect = 2e-09
Identities = 38/108 (35%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Frame = +3
Query: 309 FLXSXXXXXCFFEXGAXXADGXLTVXPXXSLNXVGXALXLLXPIFXCXXYXXRVXXXCXX 488
FL S FFE G G V P S+N +G AL P+F + +V
Sbjct: 70 FLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHSFKVQTLARS 129
Query: 489 LGFIXPAVVXXXYIFXXPGXGSEVVAXPXAXYLYXXPXPPV-GFWXAL 629
LG P VV YIF P G EV A +LY P V G W A+
Sbjct: 130 LGLQMPVVVQSMYIFKQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAV 177
>BC051300-1|AAH51300.1| 270|Homo sapiens PHYHD1 protein protein.
Length = 270
Score = 53.6 bits (123), Expect = 1e-06
Identities = 41/137 (29%), Positives = 51/137 (37%), Gaps = 1/137 (0%)
Frame = +3
Query: 309 FLXSXXXXXCFFEXGAXXADGXLTVXPXXSLNXVGXALXLLXPIFXCXXYXXRVXXXCXX 488
FL S FFE G G V P S+N +G AL P+F + +V
Sbjct: 70 FLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHSFKVQQ---- 125
Query: 489 LGFIXPAVVXXXYIFXXPGXGSEVVAXPXAXYLYXXPXPPV-GFWXALEXAPVXNGCLWL 665
P G EV A +LY P V G W A+E A + NGCLW
Sbjct: 126 -----------------PHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWF 168
Query: 666 XXXXXXXXVPXRLIRXP 716
V R++R P
Sbjct: 169 IPGSHTSGVSRRMVRAP 185
>AL672142-5|CAI10841.1| 255|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 255
Score = 53.6 bits (123), Expect = 1e-06
Identities = 41/137 (29%), Positives = 51/137 (37%), Gaps = 1/137 (0%)
Frame = +3
Query: 309 FLXSXXXXXCFFEXGAXXADGXLTVXPXXSLNXVGXALXLLXPIFXCXXYXXRVXXXCXX 488
FL S FFE G G V P S+N +G AL P+F + +V
Sbjct: 70 FLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHSFKVQQ---- 125
Query: 489 LGFIXPAVVXXXYIFXXPGXGSEVVAXPXAXYLYXXPXPPV-GFWXALEXAPVXNGCLWL 665
P G EV A +LY P V G W A+E A + NGCLW
Sbjct: 126 -----------------PHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWF 168
Query: 666 XXXXXXXXVPXRLIRXP 716
V R++R P
Sbjct: 169 IPGSHTSGVSRRMVRAP 185
>BC009373-1|AAH09373.1| 297|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 297
Score = 48.4 bits (110), Expect = 4e-05
Identities = 27/78 (34%), Positives = 32/78 (41%)
Frame = +3
Query: 309 FLXSXXXXXCFFEXGAXXADGXLTVXPXXSLNXVGXALXLLXPIFXCXXYXXRVXXXCXX 488
FL S FFE G G V P S+N +G AL P+F + +V
Sbjct: 70 FLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHSFKVQTLARS 129
Query: 489 LGFIXPAVVXXXYIFXXP 542
LG P VV YIF P
Sbjct: 130 LGLQMPVVVQSMYIFKSP 147
>AL672142-7|CAI10843.1| 297|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 297
Score = 48.4 bits (110), Expect = 4e-05
Identities = 27/78 (34%), Positives = 32/78 (41%)
Frame = +3
Query: 309 FLXSXXXXXCFFEXGAXXADGXLTVXPXXSLNXVGXALXLLXPIFXCXXYXXRVXXXCXX 488
FL S FFE G G V P S+N +G AL P+F + +V
Sbjct: 70 FLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHSFKVQTLARS 129
Query: 489 LGFIXPAVVXXXYIFXXP 542
LG P VV YIF P
Sbjct: 130 LGLQMPVVVQSMYIFKSP 147
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,717,484
Number of Sequences: 237096
Number of extensions: 679095
Number of successful extensions: 1575
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1526
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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