Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_M23
         (891 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0659 - 5021159-5021266,5021364-5021494,5021619-5021785,502...    33   0.30 
04_04_0347 + 24564589-24565296                                         29   3.8  
05_03_0515 + 14930736-14932697                                         29   5.0  
11_01_0702 - 5782202-5782277,5782692-5782760,5782878-5783026,578...    28   8.7  
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258     28   8.7  

>01_01_0659 -
           5021159-5021266,5021364-5021494,5021619-5021785,
           5021950-5022065,5022226-5022381,5022570-5022678,
           5023153-5023262,5023807-5023992,5024077-5024667
          Length = 557

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 286 KFPSIINEGRVEGDKYQISIHLPGYEQKDINVK 384
           K   ++ E +VEGD Y + +H PG+  K ++V+
Sbjct: 216 KDDEVVKEEKVEGDGYSLGLHAPGFFDKVLHVE 248


>04_04_0347 + 24564589-24565296
          Length = 235

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 82  MIALVLCGLLAAVSAAPQYYHGSSHWPY-HHYDPF 183
           M  L+   LLAA SAA   +H  ++ PY HH+ P+
Sbjct: 5   MSMLLASSLLAAASAARADHHSPAYAPYPHHHAPW 39


>05_03_0515 + 14930736-14932697
          Length = 653

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
 Frame = +1

Query: 85  IALVLCGLLAAVSAAPQYYHGSSHWPYHHYDPFSPYVRESXLDTHSL--WSNLANEMQHL 258
           + L +C +   V  +P  +    +W YH     + YV +S L T S+  WSN   +   L
Sbjct: 308 LCLEVCAIFFMVMMSPWTWASLQYWKYHRLADAAWYVFKS-LQTESMSWWSNSLGQYNFL 366

Query: 259 DDMMKE 276
                +
Sbjct: 367 SSCFSD 372


>11_01_0702 -
           5782202-5782277,5782692-5782760,5782878-5783026,
           5783119-5783250,5783343-5783671,5784166-5784172
          Length = 253

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 16/62 (25%), Positives = 24/62 (38%)
 Frame = +1

Query: 457 WDVNSEGXWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSREEMEFTTESHVRD 636
           WD N +   +   D   + + +K    +  K  VA   +    N+     EFT   HV  
Sbjct: 72  WDWNKDWECIRTFDPHGVAYQIKFNPKDTHKFAVASLMDAQVWNIRSSRHEFTLSGHVSI 131

Query: 637 VD 642
           VD
Sbjct: 132 VD 133


>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
          Length = 874

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +1

Query: 529 KQPEDSKRPVAEPTETTPTNVSREEMEFTTESHVRD 636
           +QP  SKRP AE T TT +   ++ +E   ++ VRD
Sbjct: 696 EQPHRSKRPWAETTTTTTSGRDQDHLEALYDA-VRD 730


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,931,041
Number of Sequences: 37544
Number of extensions: 383194
Number of successful extensions: 1181
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)