Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_M22
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0074 - 11461300-11461681,11461744-11462009                       29   3.7  
08_01_1027 - 10373760-10373837,10373918-10374201,10374286-10374394     28   8.6  

>06_02_0074 - 11461300-11461681,11461744-11462009
          Length = 215

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 277 FGRXRPRXFLVKVVTTGXFFNDDRGKLTGQAYGTRVLGPGGDSTXYGGRLD-WANE 441
           +GR        KV T G    D RG+  G+A G    G GGD    GG+ + WA E
Sbjct: 133 WGRRTVTEKAYKVATAGDTEGDKRGEEGGEAGGGDADGAGGDG---GGKGEGWATE 185


>08_01_1027 - 10373760-10373837,10373918-10374201,10374286-10374394
          Length = 156

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2

Query: 521 ILVRILTCQLAEWSLRSSVTEGLMSVYRPRLLTSGNCQ 634
           I+ RIL  +  EW L S V   +M    P L  SGN +
Sbjct: 82  IMERILREEAEEWELESEVRREIMEHIFPLLRRSGNAR 119


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,468,166
Number of Sequences: 37544
Number of extensions: 365817
Number of successful extensions: 928
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)