Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_M21
         (944 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    29   0.27 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.3  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 28.7 bits (61), Expect = 0.27
 Identities = 17/59 (28%), Positives = 20/59 (33%)
 Frame = +3

Query: 711 PIPGFPXPXXSPXXXXGPFPXXTPXXXXXXGXFVFPPXSXXXLPRXPXPLXXRXKXXPP 887
           P+ G P P   P    GP P  +P      G     P      PR P P+       PP
Sbjct: 258 PMMGQPPPIRPPNPMGGPRPQISPQNSNLSGGM---PSGMVGPPRPPMPMQGGAPGGPP 313


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 16/54 (29%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
 Frame = +1

Query: 703 GLLXFPXFQXHXXPPXPXXXXSPXXPXSXXXXXGPLSS--PLXPXXHCXGSPPP 858
           G    P  Q    PP P     P  P +     GP  S  PL       G+ PP
Sbjct: 572 GFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,261
Number of Sequences: 2352
Number of extensions: 4550
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 103362750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)