Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_M15
(1064 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC11E3.15 |rpl22|SPAP8A3.01|60S ribosomal protein L22|Schizosa... 46 7e-06
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 44 4e-05
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 39 0.001
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 39 0.001
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 39 0.001
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.003
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.006
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.010
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.052
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.21
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.48
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 29 0.84
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.5
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 28 2.6
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 4.5
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 27 5.9
>SPAC11E3.15 |rpl22|SPAP8A3.01|60S ribosomal protein
L22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 117
Score = 46.4 bits (105), Expect = 7e-06
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 228 KFTIDCTHPAEDSILDXGXFXKYLKEHVKVXGXTNNLSNHVVXXRD-KTXVPITXXLPLS 404
K+ ID T D I D F KYL + +KV G T NL + VV R+ + + + + S
Sbjct: 11 KYIIDATAAVNDKIFDVAAFEKYLIDRIKVDGKTGNLGSSVVVSREGSSKIAVIAHIDFS 70
Query: 405 XXXXXYXTPXYLQ 443
Y T +L+
Sbjct: 71 GRYLKYLTKKFLK 83
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 44.0 bits (99), Expect = 4e-05
Identities = 27/58 (46%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 1058 GGXGGX-GXRGGXGGG-GXXGGGRXGXGXGXGXGXXGGXXSGGXXEGXGEGAXXEGRG 891
GG GG G RGG GG G GGGR G G G GG G G G G GRG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARG-GRGGSSGGRG 65
Score = 42.3 bits (95), Expect = 1e-04
Identities = 25/59 (42%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -1
Query: 1049 GGXGXRGG-XGGGGXXGGGRXGXGXGXGXGXXGGXXSGGXXEGXGEGAXXEGRGWXGXG 876
G G RGG GG G GGR G G G G G GG G G G GRG G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRG-GARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 38.7 bits (86), Expect = 0.001
Identities = 24/54 (44%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = -1
Query: 1058 GGXGGX-GXRGGXGG--GGXXGGGRXG--XGXGXGXGXXGGXXSGGXXEGXGEG 912
GG GG G RGG GG GG GGGR G G G G GG G +G
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Score = 36.3 bits (80), Expect = 0.007
Identities = 19/38 (50%), Positives = 19/38 (50%)
Frame = -1
Query: 1064 GXGGXGGXGXRGGXGGGGXXGGGRXGXGXGXGXGXXGG 951
G G G G RGG GG G GGR G G G G GG
Sbjct: 34 GARGGGRGGARGGRGGRGGARGGRGGSSGGRG-GAKGG 70
Score = 34.3 bits (75), Expect = 0.030
Identities = 18/45 (40%), Positives = 19/45 (42%)
Frame = -3
Query: 1059 GGXGGXRXARGXRGGGXXGGGXGXXWXGXGXGXGXGGXERGXXGR 925
G GG +RG RGG G G G G G GG G GR
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGR 50
Score = 34.3 bits (75), Expect = 0.030
Identities = 22/47 (46%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = -1
Query: 1064 GXGGXGGX--GXRGGXGGGGXXG-GGRXGX--GXGXGXGXXGGXXSG 939
G GG GG G RGG GG G GGR G G G G GG G
Sbjct: 24 GRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 39.1 bits (87), Expect = 0.001
Identities = 28/66 (42%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Frame = -1
Query: 1064 GXGGXGGXGXR----GGXGGG--GXXGG-GRXGXGXGXGXGXXGGXXSGGXXEGXGEGAX 906
G GG GG G GG GGG G GG G G G G G GG G G G G
Sbjct: 209 GFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGH 268
Query: 905 XEGRGW 888
G GW
Sbjct: 269 G-GPGW 273
Score = 31.9 bits (69), Expect = 0.16
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -1
Query: 1013 GXXGGGRXGXGXGXGXGXXGGXXSGGXXEGXGEGAXXEGRGWXGXG 876
G GGG G G G G G GG GEG G G G G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGG 229
Score = 30.3 bits (65), Expect = 0.48
Identities = 21/50 (42%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = -1
Query: 1034 RGGXGGG-GXXGGGRXGXGXG-XGXGXXGGXXSGGXXEGXGEGAXXEGRG 891
RG GGG G GGG G G G G GG G G G G G G
Sbjct: 183 RGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHG-GHGGFGGGPG 231
Score = 29.1 bits (62), Expect = 1.1
Identities = 22/60 (36%), Positives = 22/60 (36%), Gaps = 5/60 (8%)
Frame = -1
Query: 1040 GXRGGX--GGGGXXGG---GRXGXGXGXGXGXXGGXXSGGXXEGXGEGAXXEGRGWXGXG 876
G GG G GG GG G G G G G G G G G G G G G G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Score = 27.1 bits (57), Expect = 4.5
Identities = 21/50 (42%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = -3
Query: 1059 GGXGGXRXARGXRGGGXXGGGXGXXWXGXGXGXGXG-GXERGXXGRRWGG 913
GG GG G GG GGG G G G G G G G G G GG
Sbjct: 211 GGFGGEGHHHGGHGG--FGGGPGGFEGGPG-GFGGGPGGFGGGLGGFGGG 257
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 500
Score = 39.1 bits (87), Expect = 0.001
Identities = 20/40 (50%), Positives = 20/40 (50%)
Frame = -1
Query: 1058 GGXGGXGXRGGXGGGGXXGGGRXGXGXGXGXGXXGGXXSG 939
GG GG G RGG GG G GGGR G G G G G
Sbjct: 451 GGRGGFGGRGGFGGRGGFGGGR---GRGRGGARSGNPNRG 487
Score = 33.9 bits (74), Expect = 0.039
Identities = 17/30 (56%), Positives = 17/30 (56%)
Frame = -1
Query: 1064 GXGGXGGXGXRGGXGGGGXXGGGRXGXGXG 975
G GG GG G RGG GGG G GR G G
Sbjct: 455 GFGGRGGFGGRGGFGGG--RGRGRGGARSG 482
Score = 29.5 bits (63), Expect = 0.84
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -1
Query: 1004 GGGRXGXGXGXGXGXXGGXXSGGXXEGXGEGAXXEG 897
GG R G G G G GG G G G G G
Sbjct: 447 GGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGGARSG 482
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 39.1 bits (87), Expect = 0.001
Identities = 26/61 (42%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = -1
Query: 1064 GXGGXGGXGX-RGGXGG--GGXXGGGRXGXGXGXGXGXXGGXXSGGXXEGXGEGAXXEGR 894
G G GG G RGG GG GG G R G G G G GG GG G G+ R
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRGGFG-GGSRGGFGGGSRGGSRGGFRGGSRGGFR 191
Query: 893 G 891
G
Sbjct: 192 G 192
Score = 26.6 bits (56), Expect = 5.9
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -2
Query: 652 GXXWGXGGLXGWX*GGGXEXGXGGGSRXDAXXCGG*XAGXXG 527
G G GG GGG G GGGSR + GG G G
Sbjct: 149 GSRGGFGGNSRGGFGGGSRGGFGGGSRGGSR--GGFRGGSRG 188
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 37.5 bits (83), Expect = 0.003
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = +2
Query: 944 SXPPXPXPXPXPXQXXPXPPPXXPPPLXPLAXLXPPXPP 1060
S PP P P P P PP PP L A PP PP
Sbjct: 413 STPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 33.1 bits (72), Expect = 0.068
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +2
Query: 914 PPXRLPXXPRSXPPXPXPXPXPXQXXPXPPPXXP--PPLXPLAXLXPPXP 1057
PP P P P P P P P P P PPL P A PP P
Sbjct: 432 PPSAPPSLPMGAPAAP-PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 32.7 bits (71), Expect = 0.090
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Frame = +2
Query: 914 PPXRLPXXPRSXPP-XPXPXPXPXQXXPXPPPXXP--PPLXPLAXLXPPXPP 1060
PP P P S PP P P P PP P PPL PP PP
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Score = 30.3 bits (65), Expect = 0.48
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +3
Query: 882 PXPPPXLPXRXLPXAFPXAPAXXPPXXXLPXPPPXP 989
P PPP +P R P P A +P PP P
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLP 424
Score = 29.9 bits (64), Expect = 0.64
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +2
Query: 929 PXXPRSXPPXPXPXPXPXQXXPXPPPXXPPPLXPLAXLXPPXPP 1060
P P S P P P P PPP PPP P PP
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPP-IPPPSNGTVSSPPNSPP 272
Score = 29.9 bits (64), Expect = 0.64
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +1
Query: 895 LPSXXAPSPXPSXXPPLXXPPSXPXPXPXPXPSRXXXXXXXXXXPPRXPXPPXPP 1059
LP PS PS P L P P P PP P P PP
Sbjct: 423 LPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 28.7 bits (61), Expect = 1.5
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 9/53 (16%)
Frame = +2
Query: 929 PXXPRSXPPXPXPXPXPXQXXPXPPP--------XXPPPL-XPLAXLXPPXPP 1060
P PRS P P + P PPP PPPL A PP PP
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP 392
Score = 28.7 bits (61), Expect = 1.5
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 9/54 (16%)
Frame = +2
Query: 926 LPXXPRSXPPXPXPXPXPXQXXPXPP---------PXXPPPLXPLAXLXPPXPP 1060
LP RS PP P P P PP P PPP P P PP
Sbjct: 353 LPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP-GRSAPALPP 405
Score = 28.3 bits (60), Expect = 1.9
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +1
Query: 913 PSPXPSXXPPLXXPP-SXPXPXPXPXPSRXXXXXXXXXXPPRXPXPPXPP 1059
P PS PP P S P P P P PS PP P P P
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSN-----GTVSSPPNSPPRPIAP 277
Score = 27.9 bits (59), Expect = 2.6
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = +1
Query: 892 PLPSXXAPSPXPSXXPPLXXPPSXPXPXPXPXPSRXXXXXXXXXXPPRXPX-PPXP 1056
PL + S P PP P + P P PS PP P PP P
Sbjct: 405 PLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 882 PXPPPXLPXRXLPXAFPXAPAXXPPXXXLPXPPPXP 989
P PP LP P APA P P PP P
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 882 PXPPPXLPXRXLPXAFPXAPAXXPPXXXLPXPPPXP 989
P PP LP P AP PP P P P P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPL-PPAAPAPPPAPAP 482
Score = 26.2 bits (55), Expect = 7.8
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +1
Query: 898 PSXXAPSPXPSXXPPLXXPPSXPXPXPXPXPSRXXXXXXXXXXPPRXPXPPXPP 1059
P PS PP+ S P P P R P PP PP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.7 bits (81), Expect = 0.006
Identities = 19/49 (38%), Positives = 20/49 (40%)
Frame = +2
Query: 914 PPXRLPXXPRSXPPXPXPXPXPXQXXPXPPPXXPPPLXPLAXLXPPXPP 1060
PP P + P P P P P PPP PPP A PP PP
Sbjct: 734 PPPPAVIVP-TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 30.3 bits (65), Expect = 0.48
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 959 PXPXPXPXQXXPXPPPXXPPPLXPLAXLXPPXPP 1060
P P P P P P PP P+ PP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 29.9 bits (64), Expect = 0.64
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 917 PXRLPXXPRSXPPXPXPXPXPXQXXPXPPPXXPP 1018
P P PP P P P P PPP PP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.84
Identities = 18/56 (32%), Positives = 21/56 (37%)
Frame = +1
Query: 892 PLPSXXAPSPXPSXXPPLXXPPSXPXPXPXPXPSRXXXXXXXXXXPPRXPXPPXPP 1059
P P+ P+P P+ P P P P P P PP P PP PP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP-----PGVAGAGPP--PPPPPPP 783
Score = 27.9 bits (59), Expect = 2.6
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +3
Query: 888 PPPXLPXRXLPXAFPXAPAXXPPXXXLPXPPPXP 989
PPP P +P P PP + PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 929 PXXPRSXPPXPXPXPXPXQXXPXPPPXXPPP 1021
P P P P P P P PPP PPP
Sbjct: 753 PPAPIMGGPPPPPPP-PGVAGAGPPPPPPPP 782
Score = 26.6 bits (56), Expect = 5.9
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +3
Query: 876 PXPXPPPXLPXRXLPXAFPXAPAXXPPXXXLPXPPPXP 989
P P PP + P P P P P PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIP-VPPPAPIMGGPPPPPPPP 768
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 35.9 bits (79), Expect = 0.010
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +2
Query: 914 PPXRLPXXPRSXPPXPXPXPXPXQXXPXPPPXXPPPLXPLAXL-XPPXPP 1060
PP P P PP P P P P PPP P A + PP P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Score = 32.3 bits (70), Expect = 0.12
Identities = 17/56 (30%), Positives = 19/56 (33%)
Frame = +1
Query: 892 PLPSXXAPSPXPSXXPPLXXPPSXPXPXPXPXPSRXXXXXXXXXXPPRXPXPPXPP 1059
P PS + P PS PP+ P P S PP P P PP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 31.1 bits (67), Expect = 0.28
Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 8/61 (13%)
Frame = +1
Query: 892 PLPSXXAPS-----PXPSXXPPL---XXPPSXPXPXPXPXPSRXXXXXXXXXXPPRXPXP 1047
P PS PS P PS PP+ PP+ P PS PP+ P P
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Query: 1048 P 1050
P
Sbjct: 205 P 205
Score = 27.9 bits (59), Expect = 2.6
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = +3
Query: 876 PXPXPPPXLPXRXLPXAFPXAPAXXPP-XXXLPXP-PPXP 989
P P P +P P A P AP PP LP PP P
Sbjct: 159 PIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 914 PPXRLPXXPRSXPPXPXPXPXPXQXXPXPPPXXPPPL 1024
PP P P P P P P PP PPPL
Sbjct: 172 PPPAQPAAPVKSP--PSAPSLPSAVPPMPPKVPPPPL 206
Score = 27.1 bits (57), Expect = 4.5
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = +3
Query: 876 PXPXPPPXLPXRXL--PXAFPXAPAXXPPXXXLPXPPP 983
P PPP P + P + P P+ PP PPP
Sbjct: 168 PSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 26.6 bits (56), Expect = 5.9
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Frame = +1
Query: 898 PSXXAP-SPXPSXXPPLXXPPSXPXPXPXPXPSRXXXXXXXXXXPPRXPXPPXP 1056
PS AP +P PP PP P P P S P P P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSP-ASAPPIPSKAPPIPSSLPPPAQP 177
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.5 bits (73), Expect = 0.052
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +1
Query: 892 PLPSXXAPS-PXPSXXPPLXXPPSXPXPXPXPXPSRXXXXXXXXXXPPRXPXPPXPP 1059
P PS AP P PS PP+ P P P P PP P PP
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Score = 32.3 bits (70), Expect = 0.12
Identities = 17/56 (30%), Positives = 19/56 (33%)
Frame = +1
Query: 892 PLPSXXAPSPXPSXXPPLXXPPSXPXPXPXPXPSRXXXXXXXXXXPPRXPXPPXPP 1059
P PS P P PS PP+ P P P P + P P PP
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP 1132
Score = 31.9 bits (69), Expect = 0.16
Identities = 19/60 (31%), Positives = 21/60 (35%), Gaps = 4/60 (6%)
Frame = +1
Query: 892 PLPSXXAPSPXPSXXPPLXXPPSXPXPXPXPXPSRXXXXXXXXXXP----PRXPXPPXPP 1059
P+PS P P PS P PS P P P + P P PP PP
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Score = 31.9 bits (69), Expect = 0.16
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +2
Query: 908 AXPPXRLPXXPRSXPPXPXPXPXPXQXXPXPPPXXPPPLXPLAXLXPPXPP 1060
A PP +P PP P P P PPP PP+ + PP PP
Sbjct: 1167 AAPP--VPAPSSGIPPVPKPAAG---VPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 31.5 bits (68), Expect = 0.21
Identities = 18/58 (31%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Frame = +1
Query: 892 PLPSXXAPSPXPSXXPPLXXPPS--XPXPXPXPXPSRXXXXXXXXXXPPRXPXPPXPP 1059
P+PS P P P+ PP+ S P P P PS P P P P
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIP 1092
Score = 31.5 bits (68), Expect = 0.21
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +1
Query: 892 PLPSXXAPS-PXPSXXPPLXXPPSXPXPXPXPXPSRXXXXXXXXXXPPRXPXPPXPP 1059
P PS PS P PS PP+ P P P P P + PP P P P
Sbjct: 1067 PAPSSEIPSIPAPSGAPPVPAPSGIP-PVPKPSVAAPPVPKPSVAVPP-VPAPSGAP 1121
Score = 31.1 bits (67), Expect = 0.28
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +1
Query: 892 PLPSXXAPSPXPSXXPPLXXPPSXPXPXPXPXPSRXXXXXXXXXXPPRXPXP 1047
P PS P P PS P PPS P P P PP P P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP-VPAP 1242
Score = 30.3 bits (65), Expect = 0.48
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +1
Query: 892 PLPSXXAPSPXPSXXPPLXXPPSXPXPXPXPXPSRXXXXXXXXXXPPRXPXPPXPP 1059
P PS P P PS P PS P P P + P P PP
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Score = 30.3 bits (65), Expect = 0.48
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +1
Query: 892 PLPSXXAPS-PXPSXXPPLXXPPSXPXPXPXPXPSRXXXXXXXXXXPPRXPXPPXPP 1059
P PS AP P PS PP+ P P P P + P P PP
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Score = 29.1 bits (62), Expect = 1.1
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 9/60 (15%)
Frame = +2
Query: 908 AXPPXRLPXXPR---SXPPXPXPX------PXPXQXXPXPPPXXPPPLXPLAXLXPPXPP 1060
A P R+P P+ PP P P P P P P P PP+ + P PP
Sbjct: 1005 AAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPP 1064
Score = 28.7 bits (61), Expect = 1.5
Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Frame = +2
Query: 917 PXRLPXXPRSX---PPXPXPXPXPXQXXP-XPPPXXPPPLXPLAXLXPPXP 1057
P P P+S P P P P P P P P PP+ P PP P
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPV-PAPSGIPPVP 1095
Score = 28.3 bits (60), Expect = 1.9
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = +2
Query: 914 PPXRLPXXPRSXPPXPXPXPXPXQXXPXPPPXXPPPLXPLAXLXPPXP 1057
P P P+ P P P P P P P P P+ PP P
Sbjct: 1097 PSVAAPPVPKPSVAVP-PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Score = 28.3 bits (60), Expect = 1.9
Identities = 17/59 (28%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Frame = +1
Query: 892 PLPSXXA---PSPXPSXXPPLXXPPSXPXPXPXPXPSRXXXXXXXXXXPPRXPXPPXPP 1059
P+P A P P PS PP+ P P P P + P P PP
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 28.3 bits (60), Expect = 1.9
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +2
Query: 914 PPXRLPXXPR-SXPPXPXPXPXPXQXXPXPPPXXPPPLXPLAXLXPPXP 1057
PP P P+ S P P P P P PP P A PP P
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAK-APPVP 1240
Score = 27.9 bits (59), Expect = 2.6
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Frame = +1
Query: 892 PLPSXXAPS-PXPSXXPPLXXPPSXPXPXPXPXPSRXXXXXXXXXXPPRXPXPPXPP 1059
P PS AP P PS P PS P P P + P P PP
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Score = 27.5 bits (58), Expect = 3.4
Identities = 15/48 (31%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = +2
Query: 917 PXRLPXXPRSXPPXPXPXPXPX-QXXPXPPPXXPPPLXPLAXLXPPXP 1057
P +P P+ P P P P P P P PP+ + PP P
Sbjct: 1088 PSGIPPVPKPSVAAP-PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVP 1134
Score = 27.1 bits (57), Expect = 4.5
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Frame = +1
Query: 892 PLPSXXAPS-PXPSXX-PPLXXPPSXPXPXPXPXPSRXXXXXXXXXXPPRXPXPPXPP 1059
P PS AP P PS PP+ P + P P P + PP P PP
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEA-PPVPKPSVGVPPVPPPSTAPP 1218
Score = 27.1 bits (57), Expect = 4.5
Identities = 17/57 (29%), Positives = 18/57 (31%), Gaps = 1/57 (1%)
Frame = +1
Query: 892 PLPSXXAPS-PXPSXXPPLXXPPSXPXPXPXPXPSRXXXXXXXXXXPPRXPXPPXPP 1059
P PS P P P+ P PPS P P P P P PP
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 26.6 bits (56), Expect = 5.9
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = +2
Query: 938 PRSXPPXPXPXPXPXQXXPXPPPXXPPPLXPLAXLXPPXP 1057
P+ PP P P P P PP+ L+ PP P
Sbjct: 987 PKDHPPSA-PLSKPVSTSPAAPLARVPPVPKLSSKAPPVP 1025
Score = 26.2 bits (55), Expect = 7.8
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Frame = +1
Query: 895 LPSXXAPSPXPS-XXPPLXXP-PSXPXPXPXPXPSRXXXXXXXXXXPPRXPXP 1047
L S P P PS PP+ P + P P P P PP P P
Sbjct: 1017 LSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.21
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Frame = +2
Query: 908 AXPPXRLPXXPRSXPPXPX--PXPXPXQXXPXPPPXXPP-PLXPLAXLXPPXP 1057
A P P P+S P P P P PPP PP P P + PP P
Sbjct: 1684 AHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 30.7 bits (66), Expect = 0.36
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +2
Query: 908 AXPPXRLPXXPRSXPPXPXPXPXPXQXXPXP--PPXXPPPLXPLAXLXPPXP 1057
A PP P PP P P P P P PP PPP P A P P
Sbjct: 1697 AAPPQMSAPTP---PPPPMSVPPPPSAPPMPAGPPSAPPPPLP-ASSAPSVP 1744
Score = 30.3 bits (65), Expect = 0.48
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 5/49 (10%)
Frame = +2
Query: 929 PXXPRSXPP-XPXPXPXPXQXXPXPPP----XXPPPLXPLAXLXPPXPP 1060
P P S PP P P P PPP PPP P PP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +1
Query: 913 PSPXPSXXPPLXXPPSXPXPXPXPXPSRXXXXXXXXXXPPRXPXPPXPP 1059
P P P PP P P P P P P P PP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.2 bits (55), Expect = 7.8
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +1
Query: 892 PLPSXXAPSPXPSXXPPLXXPPSXPXPXPXPXPS 993
P P + P PS P PPS P P P P S
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAP-PPPLPASS 1739
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.3 bits (65), Expect = 0.48
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 4/58 (6%)
Frame = +1
Query: 898 PSXXAPSPXPSXXPPLXXPPSXPXPXPXPXPSR---XXXXXXXXXXPPRXP-XPPXPP 1059
P P P P PP PP P PSR PP P PP PP
Sbjct: 229 PKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
Score = 26.2 bits (55), Expect = 7.8
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +2
Query: 941 RSXPPXPXPXPXPXQXXPXPPPXXPPP 1021
R+ P P P Q P P P PPP
Sbjct: 217 RAVSPEIPPTYTPKQADPLPAPPPPPP 243
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 29.5 bits (63), Expect = 0.84
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 1049 GGXGXRGGXGGGGXXGGGRXGXGXGXGXGXXG 954
GG GG GGG GG G G G G G
Sbjct: 438 GGSFPGGGFPGGGFPGGSYNSQGFGMGGGFPG 469
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 1.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 916 SPXPSXXPPLXXPPSXPXPXPXP 984
+P P PP PPS P P P P
Sbjct: 8 NPPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.9
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Frame = +2
Query: 944 SXPPX--PXPXPXPXQXXPXPPPXXPPP 1021
S PP P P P P P PP PPP
Sbjct: 3 SLPPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 998 PPPXXPPPLXPLAXLXPPXPP 1060
PPP PP P + PP PP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 5.9
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 3/26 (11%)
Frame = +2
Query: 938 PRSXPPXPXPXPX---PXQXXPXPPP 1006
P PP P P P P Q P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 27.9 bits (59), Expect = 2.6
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 4/61 (6%)
Frame = -1
Query: 1058 GGXGGXGXRGGXGGGGXX----GGGRXGXGXGXGXGXXGGXXSGGXXEGXGEGAXXEGRG 891
G G RG GGG GGGR G G G E G GA +
Sbjct: 14 GKEDGYNSRGRYGGGYRNNYSRGGGRGGFNDGASYGYDQRGQGRNFYESDGPGANLVKKD 73
Query: 890 W 888
W
Sbjct: 74 W 74
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 914 PPXRLPXXPRSXPPXPXPXPXPXQXXPXPPPXXPPPL 1024
PP LP P P P P P + P P PPL
Sbjct: 107 PP--LPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPL 141
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 26.6 bits (56), Expect = 5.9
Identities = 21/60 (35%), Positives = 21/60 (35%), Gaps = 11/60 (18%)
Frame = +2
Query: 914 PPXRLPXXPRSXPPX----------PXPXPXPXQXXPXPPP-XXPPPLXPLAXLXPPXPP 1060
P LP P S PP P P P P P PPPL P A P PP
Sbjct: 171 PSPNLPHQPISKPPVIPNLPKLQVHPNRLPHPIHNHPYSSPTSYPPPLCP-ATYCPSNPP 229
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,054,353
Number of Sequences: 5004
Number of extensions: 30599
Number of successful extensions: 432
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 273
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 561209266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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