Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_M14
         (878 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553...    29   3.7  
10_05_0036 + 8443957-8444112,8446063-8446129,8446685-8446743,844...    29   6.5  
03_01_0378 + 2943605-2943690,2943774-2943920,2944607-2944675,294...    29   6.5  
03_01_0379 + 2946605-2946684,2946798-2946944,2947420-2947488,294...    28   8.6  
02_01_0078 - 549625-549766,549961-550490,550592-550744,551036-55...    28   8.6  

>02_04_0360 +
           22353057-22353691,22354716-22355144,22355233-22355311,
           22355472-22355594,22356256-22356372,22356636-22356833
          Length = 526

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 265 PEXMGYGDYPKLPDIGED 318
           PE  G G+ P++PD+GED
Sbjct: 62  PEDAGEGEQPRVPDLGED 79


>10_05_0036 +
           8443957-8444112,8446063-8446129,8446685-8446743,
           8446855-8446930,8447118-8447189,8447326-8447413,
           8447489-8447744,8447934-8448049,8448247-8448470,
           8448685-8448716,8448882-8449018,8449200-8449289,
           8449383-8449557
          Length = 515

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 18/51 (35%), Positives = 22/51 (43%)
 Frame = +1

Query: 370 NEPLHATAEIFGGDRCDISIRRRFSLLHQWTWFLGTLGGFALLMVFLEDYK 522
           N+ L   A+    D CD+     +SLL  W W  G    F L  V   DYK
Sbjct: 447 NDYLTNLADSIREDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYYV---DYK 494


>03_01_0378 +
           2943605-2943690,2943774-2943920,2944607-2944675,
           2944758-2944923,2945000-2945228,2945335-2945888
          Length = 416

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +1

Query: 142 CNATRXHWNYQYQPGPYPKTPEXRAAAAKKYGMXVXEYTPYP 267
           CN T  +W + + P P  K  +  +AA K++ +     T  P
Sbjct: 216 CNDTDVYWFFTWSPSPDDKDVDKSSAATKQFVLTKLRSTNVP 257


>03_01_0379 +
           2946605-2946684,2946798-2946944,2947420-2947488,
           2947608-2947773,2947889-2948117,2948206-2948645,
           2949155-2949702,2949739-2949760
          Length = 566

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +1

Query: 124 KTAALFCNATRXHWNYQYQPGPYPKTPEXRAAAAKKY 234
           ++  L C+ T  +WNY + P P     E   A  + Y
Sbjct: 208 RSGVLPCSDTSVYWNYTWYPSPDDGDAEESVAKMRSY 244


>02_01_0078 -
           549625-549766,549961-550490,550592-550744,551036-551182
          Length = 323

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +1

Query: 187 PYPKTPEXRAAAAKKYGMXVXEYTPYPEXMGYGDYPKLPDIGEDS 321
           P P  P   AA  + +      + PY   M Y +Y   P++ ED+
Sbjct: 10  PAPPPPPAAAATDEPWITDTLPFVPYDNSMSYTNYCYYPEMFEDA 54


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,566,624
Number of Sequences: 37544
Number of extensions: 306733
Number of successful extensions: 654
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)