Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_M14
         (878 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.7  
SB_50358| Best HMM Match : DSL (HMM E-Value=6.2e-13)                   28   8.7  

>SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2070

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/24 (41%), Positives = 19/24 (79%)
 Frame = +3

Query: 75   VFVTEKRSVQQLSIHKQNGSSVLQ 146
            ++VTEK  ++Q+S  + +G+S+LQ
Sbjct: 1138 LYVTEKEDLEQISFDRLDGNSILQ 1161


>SB_50358| Best HMM Match : DSL (HMM E-Value=6.2e-13)
          Length = 557

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +1

Query: 286 DYPK-LPDIGEDSKDP--HYPYDNPELKRNFNEPLHATAEIF 402
           D+PK +P    D   P  H P D+P++  +F+ P+ A   +F
Sbjct: 301 DHPKVIPHTPTDHPKPVPHTPTDHPKVVESFDVPVEAVRRLF 342


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,766,862
Number of Sequences: 59808
Number of extensions: 344043
Number of successful extensions: 918
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2502612210
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)