Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_M14
         (878 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032644-3|CAA21668.1|  215|Caenorhabditis elegans Hypothetical ...    44   1e-04
AL032644-2|CAA21667.1|  199|Caenorhabditis elegans Hypothetical ...    44   1e-04
U53341-1|AAC69110.3|  727|Caenorhabditis elegans Hypothetical pr...    29   3.3  

>AL032644-3|CAA21668.1|  215|Caenorhabditis elegans Hypothetical
           protein Y51H1A.3b protein.
          Length = 215

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
 Frame = +1

Query: 175 YQPGPYPKTPEXRAAAAKKYGMXVXEYTPYPEX---MGYGDYPKLPDIGEDSKDPHYPYD 345
           ++P   P   E R AAA KYG+   +Y    +       GDYP L  I  D KDP+  + 
Sbjct: 54  HKPSAPPTNEEERRAAAVKYGLRPEDYQSMDKDDVIKFAGDYPDLGVITYDHKDPYEAWT 113

Query: 346 NPELKRNFNEPLHATAEIFGGDR 414
           + + +RN+ E +      + GDR
Sbjct: 114 DRQNRRNWGELVPIDMMRYRGDR 136


>AL032644-2|CAA21667.1|  199|Caenorhabditis elegans Hypothetical
           protein Y51H1A.3a protein.
          Length = 199

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
 Frame = +1

Query: 175 YQPGPYPKTPEXRAAAAKKYGMXVXEYTPYPEX---MGYGDYPKLPDIGEDSKDPHYPYD 345
           ++P   P   E R AAA KYG+   +Y    +       GDYP L  I  D KDP+  + 
Sbjct: 38  HKPSAPPTNEEERRAAAVKYGLRPEDYQSMDKDDVIKFAGDYPDLGVITYDHKDPYEAWT 97

Query: 346 NPELKRNFNEPLHATAEIFGGDR 414
           + + +RN+ E +      + GDR
Sbjct: 98  DRQNRRNWGELVPIDMMRYRGDR 120


>U53341-1|AAC69110.3|  727|Caenorhabditis elegans Hypothetical
           protein F49E10.5 protein.
          Length = 727

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 289 YPKLPDIGEDSKDPHYPYDNPEL 357
           +P LP+    S  PH+PY NP L
Sbjct: 530 FPTLPNFPPMSMSPHFPYPNPLL 552


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,040,817
Number of Sequences: 27780
Number of extensions: 264277
Number of successful extensions: 621
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)