Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_M08
         (894 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_1025 - 10506144-10506226,10506643-10506699,10507502-105076...    32   0.71 
06_03_0243 + 18629793-18630047,18630362-18630442,18631911-186323...    29   3.8  
06_02_0019 - 10656005-10657511,10657712-10658739                       29   5.0  
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624...    29   6.6  

>12_01_1025 -
           10506144-10506226,10506643-10506699,10507502-10507605,
           10507884-10507937,10508107-10508193,10509027-10509214,
           10509793-10509854,10510084-10510354,10510756-10510834,
           10511715-10511913,10512816-10512960,10513324-10513416,
           10514449-10514736
          Length = 569

 Score = 31.9 bits (69), Expect = 0.71
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +1

Query: 436 ETFYKTACFARVHLNQGQFLYAF-YIAVIQRSDCHGF 543
           ETF+ TAC  R HL QG+ + A+ Y+   +  DC GF
Sbjct: 427 ETFFTTACMGRGHLCQGKLVDAYRYLHKEKDMDC-GF 462


>06_03_0243 +
           18629793-18630047,18630362-18630442,18631911-18632305,
           18632471-18632926,18633156-18633247,18633528-18633683,
           18635657-18636057
          Length = 611

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 17/42 (40%), Positives = 19/42 (45%)
 Frame = +2

Query: 20  PLSGLLHTLPVCFSAGXXAVCLHSWLGLSPSRSAVQSQSRAP 145
           PL   LH L  CF       C H  L   PSRS+ +S S  P
Sbjct: 163 PLRCRLHALWRCFFHWRSRCCRHRGLSPPPSRSSPRSPSSLP 204


>06_02_0019 - 10656005-10657511,10657712-10658739
          Length = 844

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 10/32 (31%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
 Frame = -2

Query: 599 STSIXINILGY-TSYGAGTTKPWQSERWITAM 507
           +T+I ++++G   +YGAG+++ W++  ++ AM
Sbjct: 750 NTTIVLDMIGLLVAYGAGSSREWETSGYVIAM 781


>03_02_0186 -
           6243487-6243799,6243892-6244400,6244495-6244557,
           6245482-6245681,6246125-6246519,6246776-6246888
          Length = 530

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/24 (58%), Positives = 14/24 (58%)
 Frame = +3

Query: 453 CLFCACASQSRSILVCLLHRCYPA 524
           CLFC     SR ILVC L RC  A
Sbjct: 58  CLFCEANFISRRILVCDLLRCLVA 81


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,546,972
Number of Sequences: 37544
Number of extensions: 312506
Number of successful extensions: 594
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)