BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP02_F_M07 (876 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 59 1e-07 UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 52 2e-05 UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 52 3e-05 UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 50 1e-04 UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002 UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 44 0.004 UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.036 UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.083 UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 40 0.11 UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5 UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 33 9.5 >UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; Escherichia coli|Rep: Putative uncharacterized protein - Escherichia coli Length = 147 Score = 59.3 bits (137), Expect = 1e-07 Identities = 38/84 (45%), Positives = 46/84 (54%) Frame = +1 Query: 319 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNXXXTQERTCEQXASXRP 498 R +C G +PLPRSLTR ARSFGCGERY+LT G T++ ++ Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD----GDGNFLEDTRKTLSKEE----- 76 Query: 499 GTVXRPRCWRFSIGSAPLNEXHKN 570 RPR RFSIGSAPL K+ Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKS 97 Score = 39.9 bits (89), Expect = 0.083 Identities = 17/26 (65%), Positives = 18/26 (69%) Frame = +2 Query: 554 TSXTKIDAHVRGGXTRQDYKDTXRFP 631 TS K DA + GG TRQDYKD RFP Sbjct: 92 TSIAKSDAQISGGETRQDYKDPRRFP 117 >UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE - Myxococcus xanthus Length = 486 Score = 52.0 bits (119), Expect = 2e-05 Identities = 29/51 (56%), Positives = 31/51 (60%), Gaps = 1/51 (1%) Frame = +1 Query: 295 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQ 444 CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQ 316 >UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; root|Rep: Putative uncharacterized protein - Escherichia coli Length = 61 Score = 51.6 bits (118), Expect = 3e-05 Identities = 26/38 (68%), Positives = 26/38 (68%) Frame = -1 Query: 495 PXAGXLLTXSFLRXXXILWITVLPPLSELIPLAAAERP 382 P LLT SF ILWITVLPPLSEL PLAA ERP Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56 >UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; root|Rep: Putative uncharacterized protein - Salmonella typhimurium Length = 127 Score = 49.6 bits (113), Expect = 1e-04 Identities = 22/26 (84%), Positives = 22/26 (84%) Frame = +2 Query: 554 TSXTKIDAHVRGGXTRQDYKDTXRFP 631 TS TKIDA VRGG TRQDYKDT RFP Sbjct: 24 TSITKIDAQVRGGETRQDYKDTRRFP 49 >UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40 (SV40) Length = 364 Score = 45.2 bits (102), Expect = 0.002 Identities = 19/19 (100%), Positives = 19/19 (100%) Frame = +2 Query: 98 DPDMIRYIDEFGQTTTRMQ 154 DPDMIRYIDEFGQTTTRMQ Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364 >UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organisms|Rep: Predicted protein - Nematostella vectensis Length = 97 Score = 44.4 bits (100), Expect = 0.004 Identities = 19/26 (73%), Positives = 20/26 (76%) Frame = +2 Query: 554 TSXTKIDAHVRGGXTRQDYKDTXRFP 631 TS TK DA + GG TRQDYKDT RFP Sbjct: 60 TSITKSDAQISGGETRQDYKDTRRFP 85 >UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Magnoliophyta|Rep: Putative reverse transcriptase - Zingiber officinale (Ginger) Length = 49 Score = 41.1 bits (92), Expect = 0.036 Identities = 19/39 (48%), Positives = 25/39 (64%) Frame = +2 Query: 227 QVNNNNCIHFMFQVQGXVWEVFSALMNRPTRGERRFAYW 343 ++ + NC+ + V +ALMNRPTRGERRFAYW Sbjct: 3 ELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41 >UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterobacteriaceae|Rep: Lactose operon repressor - Escherichia coli (strain K12) Length = 360 Score = 39.9 bits (89), Expect = 0.083 Identities = 19/24 (79%), Positives = 21/24 (87%) Frame = -2 Query: 365 ERGSGRAPNTQTASPRALADSLMQ 294 +R + APNTQTASPRALADSLMQ Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348 >UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-hemolysin - Aeromonas hydrophila Length = 59 Score = 39.5 bits (88), Expect = 0.11 Identities = 18/19 (94%), Positives = 18/19 (94%) Frame = +3 Query: 414 HSKAVIRLSTESGXNAGKN 470 HSKAVIRLSTESG NAGKN Sbjct: 40 HSKAVIRLSTESGDNAGKN 58 >UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; Methanocorpusculum labreanum Z|Rep: Putative uncharacterized protein - Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) Length = 109 Score = 33.9 bits (74), Expect = 5.5 Identities = 21/55 (38%), Positives = 28/55 (50%) Frame = -3 Query: 256 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 92 +MNA V + FIAA + +T + AFF L S G ++VSY VW L Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76 >UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma factor - Lentisphaera araneosa HTCC2155 Length = 201 Score = 33.1 bits (72), Expect = 9.5 Identities = 17/56 (30%), Positives = 27/56 (48%) Frame = +2 Query: 176 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGXVWEVFSALMNRPTRGERRFAYW 343 + DA F+ I N +N+++C + +V VWE + P RG +F YW Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 658,596,173 Number of Sequences: 1657284 Number of extensions: 10906338 Number of successful extensions: 39303 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 27213 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 35947 length of database: 575,637,011 effective HSP length: 100 effective length of database: 409,908,611 effective search space used: 78292544701 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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