Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_M06
         (891 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    25   4.1  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   5.4  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   9.4  

>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 15/54 (27%), Positives = 23/54 (42%)
 Frame = +3

Query: 372 VEPEISLNKVGHALHLLHPIFRCYTYSERVKSICKELGFIEPAVVQSMYIFKNP 533
           VEPE+           +HP      + E+ K++    GF+       +YIF NP
Sbjct: 41  VEPELPYGNFKEMGKSIHPAHLSQRFYEQYKAVPGSPGFV------GLYIFLNP 88


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 806 YYYTATLYIRAPQQI**ESPRLHFPRG 886
           Y++TAT  I A  ++   SP+ +F  G
Sbjct: 845 YFFTATFAIEATMKLIAMSPKYYFQEG 871


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +2

Query: 338 RGSHRRRWKSYSRTGDFIKQGRSRTASSTS 427
           R  +RR  K Y   G   K G SR + S+S
Sbjct: 609 RDDYRRTEKDYRGNGKHDKYGSSRHSDSSS 638


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 939,496
Number of Sequences: 2352
Number of extensions: 19149
Number of successful extensions: 35
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)